Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 HIGD1AP9-201ENST00000550710 279 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 AC009171.1-201ENST00000572673 266 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 AC100812.1-201ENST00000607622 580 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 RMST_9.1-201ENST00000619945 193 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 AC110994.2-201ENST00000635481 492 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 DTNA-209ENST00000556414 1626 ntTSL 2 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 FOXR2-201ENST00000339140 1926 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 CPEB4-209ENST00000522336 1551 ntTSL 5 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 TLK2P2-201ENST00000414066 2240 ntBASIC8.89□□□□□ -0.99
VARS2Q5ST30 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
VARS2Q5ST30 CORIN-208ENST00000508498 3200 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
VARS2Q5ST30 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
VARS2Q5ST30 CAMK2D-214ENST00000515496 1533 ntTSL 5 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 OR2T10-202ENST00000642090 3519 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
VARS2Q5ST30 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
VARS2Q5ST30 STAT4-201ENST00000358470 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
VARS2Q5ST30 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
VARS2Q5ST30 BRDT-203ENST00000370389 3696 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
VARS2Q5ST30 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
VARS2Q5ST30 AL449403.2-201ENST00000624497 2662 ntTSL 2 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 AP000542.3-201ENST00000623391 6114 ntBASIC8.88□□□□□ -0.99
VARS2Q5ST30 ERMAP-201ENST00000328249 3949 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
VARS2Q5ST30 AC007638.2-201ENST00000574716 1740 ntTSL 2 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 ZNF185-203ENST00000324823 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
VARS2Q5ST30 COL25A1-208ENST00000610288 4799 ntTSL 5 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 BCL9P1-201ENST00000506012 2561 ntBASIC8.88□□□□□ -0.99
VARS2Q5ST30 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
VARS2Q5ST30 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
VARS2Q5ST30 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 MAMDC2-AS1-204ENST00000448377 1923 ntTSL 5 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 SAMD8-201ENST00000372687 6935 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
VARS2Q5ST30 ISX-201ENST00000308700 3384 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
VARS2Q5ST30 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
VARS2Q5ST30 STON2-201ENST00000267540 2977 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
VARS2Q5ST30 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
VARS2Q5ST30 RN7SKP76-201ENST00000364419 323 ntBASIC8.88□□□□□ -0.99
VARS2Q5ST30 SNORD113-1-201ENST00000365321 69 ntBASIC8.88□□□□□ -0.99
VARS2Q5ST30 RNU6-26P-201ENST00000383985 107 ntBASIC8.88□□□□□ -0.99
VARS2Q5ST30 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
VARS2Q5ST30 GLRX3P2-201ENST00000405027 1038 ntBASIC8.88□□□□□ -0.99
VARS2Q5ST30 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 MTCO3P19-201ENST00000415864 321 ntBASIC8.88□□□□□ -0.99
VARS2Q5ST30 Z93019.1-201ENST00000416450 973 ntBASIC8.88□□□□□ -0.99
VARS2Q5ST30 AL356968.1-201ENST00000416622 474 ntBASIC8.88□□□□□ -0.99
VARS2Q5ST30 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
VARS2Q5ST30 OR5W1P-201ENST00000423705 938 ntBASIC8.88□□□□□ -0.99
VARS2Q5ST30 GAPDHP51-201ENST00000426454 1000 ntBASIC8.88□□□□□ -0.99
VARS2Q5ST30 AC099066.1-201ENST00000428148 534 ntTSL 5 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 NEFLP1-201ENST00000436364 984 ntBASIC8.88□□□□□ -0.99
VARS2Q5ST30 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
VARS2Q5ST30 AC114755.1-201ENST00000453101 868 ntBASIC8.88□□□□□ -0.99
VARS2Q5ST30 RNU6-329P-201ENST00000459618 107 ntBASIC8.88□□□□□ -0.99
VARS2Q5ST30 RN7SL508P-201ENST00000464472 303 ntBASIC8.88□□□□□ -0.99
VARS2Q5ST30 RPL29P23-201ENST00000486188 442 ntBASIC8.88□□□□□ -0.99
VARS2Q5ST30 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
VARS2Q5ST30 EGFLAM-AS1-201ENST00000508986 331 ntTSL 3 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 RNU7-179P-201ENST00000516608 68 ntBASIC8.88□□□□□ -0.99
VARS2Q5ST30 AC087379.2-201ENST00000532242 471 ntTSL 3 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 AC074029.3-201ENST00000618623 312 ntBASIC8.88□□□□□ -0.99
VARS2Q5ST30 AL122023.1-201ENST00000622847 530 ntBASIC8.88□□□□□ -0.99
VARS2Q5ST30 AC093591.3-201ENST00000634516 308 ntBASIC8.88□□□□□ -0.99
VARS2Q5ST30 CDC42SE2-208ENST00000505065 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
VARS2Q5ST30 GLDCP1-201ENST00000510885 2678 ntBASIC8.88□□□□□ -0.99
VARS2Q5ST30 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
VARS2Q5ST30 ATP5A1P3-201ENST00000573189 1507 ntBASIC8.88□□□□□ -0.99
VARS2Q5ST30 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
VARS2Q5ST30 LINC01915-201ENST00000577994 2321 ntTSL 2 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 MAATS1-201ENST00000273390 4433 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
VARS2Q5ST30 OR51D1-202ENST00000641817 3561 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
VARS2Q5ST30 ZNF215-202ENST00000414517 3257 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
VARS2Q5ST30 PIGK-201ENST00000359130 1926 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
VARS2Q5ST30 LGSN-201ENST00000370657 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
VARS2Q5ST30 AC092279.2-201ENST00000623742 2189 ntBASIC8.88□□□□□ -0.99
VARS2Q5ST30 FRRS1-201ENST00000287474 2678 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
VARS2Q5ST30 AMPH-202ENST00000356264 3418 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
VARS2Q5ST30 HAUS2-201ENST00000260372 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VARS2Q5ST30 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms