Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.67□□□□□ -1.5
HMGCS1Q01581 AL157762.1-201ENST00000619612 415 ntBASIC5.67□□□□□ -1.5
HMGCS1Q01581 FAM27E2-201ENST00000619668 403 ntBASIC5.67□□□□□ -1.5
HMGCS1Q01581 AC000095.2-202ENST00000637415 154 ntBASIC5.67□□□□□ -1.5
HMGCS1Q01581 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGCS1Q01581 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMGCS1Q01581 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
HMGCS1Q01581 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGCS1Q01581 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMGCS1Q01581 AC130360.2-201ENST00000533477 1556 ntBASIC5.67□□□□□ -1.5
HMGCS1Q01581 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMGCS1Q01581 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMGCS1Q01581 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCS1Q01581 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 MSL3P1-202ENST00000440028 1468 ntBASIC5.66□□□□□ -1.5
HMGCS1Q01581 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCS1Q01581 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 AC107977.1-201ENST00000355745 939 ntBASIC5.66□□□□□ -1.5
HMGCS1Q01581 RN7SKP77-201ENST00000363261 353 ntBASIC5.66□□□□□ -1.5
HMGCS1Q01581 U3.10-201ENST00000364459 214 ntBASIC5.66□□□□□ -1.5
HMGCS1Q01581 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 RPL35AP3-201ENST00000414680 288 ntBASIC5.66□□□□□ -1.5
HMGCS1Q01581 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 RPS4XP5-201ENST00000419038 768 ntBASIC5.66□□□□□ -1.5
HMGCS1Q01581 RPL24P2-201ENST00000421023 475 ntBASIC5.66□□□□□ -1.5
HMGCS1Q01581 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 LDHAP2-201ENST00000437325 985 ntBASIC5.66□□□□□ -1.5
HMGCS1Q01581 OR52I1-201ENST00000450052 1050 ntBASIC5.66□□□□□ -1.5
HMGCS1Q01581 CTSLP6-201ENST00000458273 1002 ntBASIC5.66□□□□□ -1.5
HMGCS1Q01581 RN7SL269P-201ENST00000467795 305 ntBASIC5.66□□□□□ -1.5
HMGCS1Q01581 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.66□□□□□ -1.5
HMGCS1Q01581 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 AC126615.2-201ENST00000553003 515 ntBASIC5.66□□□□□ -1.5
HMGCS1Q01581 AC107958.1-201ENST00000556576 290 ntBASIC5.66□□□□□ -1.5
HMGCS1Q01581 AL845552.1-201ENST00000556820 323 ntBASIC5.66□□□□□ -1.5
HMGCS1Q01581 AC026826.3-201ENST00000561747 158 ntBASIC5.66□□□□□ -1.5
HMGCS1Q01581 AC090826.1-203ENST00000569235 490 ntBASIC5.66□□□□□ -1.5
HMGCS1Q01581 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 AC097641.3-201ENST00000613523 464 ntBASIC5.66□□□□□ -1.5
HMGCS1Q01581 AL445670.1-201ENST00000618889 801 ntBASIC5.66□□□□□ -1.5
HMGCS1Q01581 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCS1Q01581 AP001052.1-201ENST00000626421 99 ntBASIC5.66□□□□□ -1.5
HMGCS1Q01581 AC099654.11-201ENST00000638857 294 ntBASIC5.66□□□□□ -1.5
HMGCS1Q01581 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCS1Q01581 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCS1Q01581 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
HMGCS1Q01581 AC006600.2-201ENST00000624834 2506 ntBASIC5.66□□□□□ -1.5
HMGCS1Q01581 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCS1Q01581 RBPJP7-201ENST00000442803 1447 ntBASIC5.65□□□□□ -1.5
HMGCS1Q01581 RBPJP5-201ENST00000449433 1447 ntBASIC5.65□□□□□ -1.5
HMGCS1Q01581 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGCS1Q01581 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMGCS1Q01581 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGCS1Q01581 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGCS1Q01581 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGCS1Q01581 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
HMGCS1Q01581 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
HMGCS1Q01581 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
HMGCS1Q01581 SELENOWP1-201ENST00000322792 252 ntBASIC5.65□□□□□ -1.5
HMGCS1Q01581 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGCS1Q01581 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
HMGCS1Q01581 RN7SKP17-201ENST00000411242 351 ntBASIC5.65□□□□□ -1.5
HMGCS1Q01581 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGCS1Q01581 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.65□□□□□ -1.5
HMGCS1Q01581 AC004129.2-201ENST00000457229 287 ntBASIC5.65□□□□□ -1.5
HMGCS1Q01581 AC023245.1-201ENST00000468501 517 ntBASIC5.65□□□□□ -1.5
HMGCS1Q01581 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGCS1Q01581 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGCS1Q01581 RN7SKP35-201ENST00000517210 151 ntBASIC5.65□□□□□ -1.5
HMGCS1Q01581 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGCS1Q01581 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.65□□□□□ -1.5
HMGCS1Q01581 OR4A42P-201ENST00000531397 938 ntBASIC5.65□□□□□ -1.5
HMGCS1Q01581 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.65□□□□□ -1.5
HMGCS1Q01581 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGCS1Q01581 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGCS1Q01581 AP005119.1-201ENST00000580956 292 ntBASIC5.65□□□□□ -1.5
HMGCS1Q01581 MIR4420-201ENST00000583944 77 ntBASIC5.65□□□□□ -1.5
HMGCS1Q01581 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGCS1Q01581 AC060780.2-201ENST00000589047 198 ntBASIC5.65□□□□□ -1.5
HMGCS1Q01581 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms