Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC009784.1-201ENST00000426484 460 ntBASIC4.05□□□□□ -1.76
RPL39P62891 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC4.05□□□□□ -1.76
RPL39P62891 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.05□□□□□ -1.76
RPL39P62891 AC010086.1-201ENST00000437359 1052 ntBASIC4.05□□□□□ -1.76
RPL39P62891 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.05□□□□□ -1.76
RPL39P62891 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.05□□□□□ -1.76
RPL39P62891 SEPHS1P4-201ENST00000446112 1176 ntBASIC4.05□□□□□ -1.76
RPL39P62891 RPS18P1-201ENST00000447840 458 ntBASIC4.05□□□□□ -1.76
RPL39P62891 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC4.05□□□□□ -1.76
RPL39P62891 SLAMF6P1-201ENST00000451067 602 ntBASIC4.05□□□□□ -1.76
RPL39P62891 AL929410.2-201ENST00000451170 189 ntBASIC4.05□□□□□ -1.76
RPL39P62891 SUMO2P10-201ENST00000452006 288 ntBASIC4.05□□□□□ -1.76
RPL39P62891 AC002553.3-201ENST00000453002 341 ntBASIC4.05□□□□□ -1.76
RPL39P62891 AL354872.1-201ENST00000456361 967 ntBASIC4.05□□□□□ -1.76
RPL39P62891 RN7SL552P-201ENST00000462094 276 ntBASIC4.05□□□□□ -1.76
RPL39P62891 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.05□□□□□ -1.76
RPL39P62891 OSTC-204ENST00000512478 663 ntTSL 5 BASIC4.05□□□□□ -1.76
RPL39P62891 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.05□□□□□ -1.76
RPL39P62891 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.05□□□□□ -1.76
RPL39P62891 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC4.05□□□□□ -1.76
RPL39P62891 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.05□□□□□ -1.76
RPL39P62891 AC137627.1-201ENST00000545761 289 ntBASIC4.05□□□□□ -1.76
RPL39P62891 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.05□□□□□ -1.76
RPL39P62891 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.05□□□□□ -1.76
RPL39P62891 AP005136.2-201ENST00000583253 1049 ntBASIC4.05□□□□□ -1.76
RPL39P62891 OR7E19P-202ENST00000589942 844 ntBASIC4.05□□□□□ -1.76
RPL39P62891 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RPL39P62891 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC4.05□□□□□ -1.76
RPL39P62891 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RPL39P62891 AC002069.2-201ENST00000603580 883 ntBASIC4.05□□□□□ -1.76
RPL39P62891 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC4.05□□□□□ -1.76
RPL39P62891 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RPL39P62891 AL021918.2-201ENST00000613415 194 ntBASIC4.05□□□□□ -1.76
RPL39P62891 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC4.05□□□□□ -1.76
RPL39P62891 CLUHP10-201ENST00000631979 980 ntBASIC4.05□□□□□ -1.76
RPL39P62891 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RPL39P62891 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
RPL39P62891 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RPL39P62891 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.05□□□□□ -1.76
RPL39P62891 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RPL39P62891 AL034546.1-201ENST00000623740 3693 ntBASIC4.05□□□□□ -1.76
RPL39P62891 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.05□□□□□ -1.76
RPL39P62891 AC002525.1-201ENST00000624392 1622 ntBASIC4.05□□□□□ -1.76
RPL39P62891 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RPL39P62891 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
RPL39P62891 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
RPL39P62891 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RPL39P62891 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
RPL39P62891 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
RPL39P62891 USP40-202ENST00000409945 1946 ntTSL 2 BASIC4.05□□□□□ -1.76
RPL39P62891 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
RPL39P62891 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RPL39P62891 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RPL39P62891 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC4.05□□□□□ -1.76
RPL39P62891 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RPL39P62891 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
RPL39P62891 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RPL39P62891 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RPL39P62891 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.04□□□□□ -1.76
RPL39P62891 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.04□□□□□ -1.76
RPL39P62891 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.04□□□□□ -1.76
RPL39P62891 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RPL39P62891 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.04□□□□□ -1.76
RPL39P62891 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RPL39P62891 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
RPL39P62891 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RPL39P62891 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RPL39P62891 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
RPL39P62891 SNORA21-201ENST00000362423 132 ntBASIC4.04□□□□□ -1.76
RPL39P62891 RN7SKP81-201ENST00000365603 331 ntBASIC4.04□□□□□ -1.76
RPL39P62891 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC4.04□□□□□ -1.76
RPL39P62891 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC4.04□□□□□ -1.76
RPL39P62891 AC096921.1-201ENST00000411661 375 ntBASIC4.04□□□□□ -1.76
RPL39P62891 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC4.04□□□□□ -1.76
RPL39P62891 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.04□□□□□ -1.76
RPL39P62891 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RPL39P62891 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC4.04□□□□□ -1.76
RPL39P62891 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.04□□□□□ -1.76
RPL39P62891 FTLP8-201ENST00000446770 267 ntBASIC4.04□□□□□ -1.76
RPL39P62891 AL157777.1-201ENST00000468100 304 ntBASIC4.04□□□□□ -1.76
RPL39P62891 RPS7P6-201ENST00000485777 579 ntBASIC4.04□□□□□ -1.76
RPL39P62891 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC4.04□□□□□ -1.76
RPL39P62891 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RPL39P62891 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.04□□□□□ -1.76
RPL39P62891 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC4.04□□□□□ -1.76
RPL39P62891 CR383658.1-201ENST00000514609 734 ntBASIC4.04□□□□□ -1.76
RPL39P62891 PSMC1P8-201ENST00000536820 1296 ntBASIC4.04□□□□□ -1.76
RPL39P62891 TDGP1-201ENST00000543961 1229 ntBASIC4.04□□□□□ -1.76
RPL39P62891 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.04□□□□□ -1.76
RPL39P62891 NIFKP4-201ENST00000567275 1192 ntBASIC4.04□□□□□ -1.76
RPL39P62891 AC090286.3-201ENST00000573133 187 ntBASIC4.04□□□□□ -1.76
RPL39P62891 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC4.04□□□□□ -1.76
RPL39P62891 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC4.04□□□□□ -1.76
RPL39P62891 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.04□□□□□ -1.76
RPL39P62891 IGKV2OR2-1-201ENST00000605129 304 ntBASIC4.04□□□□□ -1.76
RPL39P62891 AC023206.1-201ENST00000605824 298 ntBASIC4.04□□□□□ -1.76
RPL39P62891 NANOGP3-201ENST00000605855 286 ntBASIC4.04□□□□□ -1.76
RPL39P62891 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC4.04□□□□□ -1.76
RPL39P62891 AL162574.1-201ENST00000615702 950 ntBASIC4.04□□□□□ -1.76
RPL39P62891 AL122023.1-201ENST00000622847 530 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 147.6 ms