Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 RPL12P30-201ENST00000488389 499 ntBASIC6.43□□□□□ -1.38
HDAC4P56524 MORF4L2P1-201ENST00000503761 858 ntBASIC6.43□□□□□ -1.38
HDAC4P56524 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.43□□□□□ -1.38
HDAC4P56524 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.43□□□□□ -1.38
HDAC4P56524 RNA5SP473-201ENST00000516402 125 ntBASIC6.43□□□□□ -1.38
HDAC4P56524 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.43□□□□□ -1.38
HDAC4P56524 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.43□□□□□ -1.38
HDAC4P56524 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC4P56524 AC135626.1-201ENST00000556983 435 ntBASIC6.43□□□□□ -1.38
HDAC4P56524 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC4P56524 MIR4701-201ENST00000583094 63 ntBASIC6.43□□□□□ -1.38
HDAC4P56524 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.43□□□□□ -1.38
HDAC4P56524 AC027334.1-201ENST00000603257 310 ntBASIC6.43□□□□□ -1.38
HDAC4P56524 AP001823.1-201ENST00000604056 1003 ntBASIC6.43□□□□□ -1.38
HDAC4P56524 AC138473.1-201ENST00000605717 526 ntBASIC6.43□□□□□ -1.38
HDAC4P56524 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.43□□□□□ -1.38
HDAC4P56524 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.43□□□□□ -1.38
HDAC4P56524 MIR6778-201ENST00000617912 73 ntBASIC6.43□□□□□ -1.38
HDAC4P56524 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.43□□□□□ -1.38
HDAC4P56524 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC4P56524 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC4P56524 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC4P56524 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC4P56524 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC4P56524 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
HDAC4P56524 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC4P56524 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.43□□□□□ -1.38
HDAC4P56524 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC4P56524 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC4P56524 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC4P56524 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC4P56524 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
HDAC4P56524 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HDAC4P56524 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
HDAC4P56524 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HDAC4P56524 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HDAC4P56524 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HDAC4P56524 WDR95P-201ENST00000425638 1542 ntBASIC6.42□□□□□ -1.38
HDAC4P56524 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.42□□□□□ -1.38
HDAC4P56524 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HDAC4P56524 RN7SKP171-201ENST00000364417 303 ntBASIC6.42□□□□□ -1.38
HDAC4P56524 AL360271.1-201ENST00000395679 510 ntBASIC6.42□□□□□ -1.38
HDAC4P56524 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.42□□□□□ -1.38
HDAC4P56524 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HDAC4P56524 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.42□□□□□ -1.38
HDAC4P56524 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC6.42□□□□□ -1.38
HDAC4P56524 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HDAC4P56524 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.42□□□□□ -1.38
HDAC4P56524 RPS27P20-201ENST00000492051 246 ntBASIC6.42□□□□□ -1.38
HDAC4P56524 AC090958.1-201ENST00000511122 351 ntBASIC6.42□□□□□ -1.38
HDAC4P56524 CCNHP1-201ENST00000513311 678 ntBASIC6.42□□□□□ -1.38
HDAC4P56524 RNA5SP441-201ENST00000516809 88 ntBASIC6.42□□□□□ -1.38
HDAC4P56524 AC090651.1-201ENST00000567865 634 ntBASIC6.42□□□□□ -1.38
HDAC4P56524 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.42□□□□□ -1.38
HDAC4P56524 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.42□□□□□ -1.38
HDAC4P56524 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.42□□□□□ -1.38
HDAC4P56524 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.42□□□□□ -1.38
HDAC4P56524 AC005828.7-201ENST00000607331 556 ntBASIC6.42□□□□□ -1.38
HDAC4P56524 AC096586.2-201ENST00000610260 441 ntBASIC6.42□□□□□ -1.38
HDAC4P56524 MTCO1P1-201ENST00000624263 1081 ntBASIC6.42□□□□□ -1.38
HDAC4P56524 AC111152.1-202ENST00000635848 339 ntBASIC6.42□□□□□ -1.38
HDAC4P56524 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
HDAC4P56524 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
HDAC4P56524 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.42□□□□□ -1.38
HDAC4P56524 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HDAC4P56524 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.42□□□□□ -1.38
HDAC4P56524 MTCO1P22-201ENST00000604619 1360 ntBASIC6.42□□□□□ -1.38
HDAC4P56524 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HDAC4P56524 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.42□□□□□ -1.38
HDAC4P56524 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
HDAC4P56524 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
HDAC4P56524 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC4P56524 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC4P56524 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC4P56524 AL121768.1-201ENST00000613917 2544 ntBASIC6.41□□□□□ -1.38
HDAC4P56524 AC090181.3-201ENST00000624777 1514 ntBASIC6.41□□□□□ -1.38
HDAC4P56524 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.41□□□□□ -1.38
HDAC4P56524 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC4P56524 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
HDAC4P56524 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.41□□□□□ -1.38
HDAC4P56524 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC4P56524 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
HDAC4P56524 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
HDAC4P56524 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC4P56524 AP002512.4-202ENST00000641599 4530 ntBASIC6.41□□□□□ -1.38
HDAC4P56524 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC4P56524 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC4P56524 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.41□□□□□ -1.38
HDAC4P56524 SNORA11B-201ENST00000408175 129 ntBASIC6.41□□□□□ -1.38
HDAC4P56524 RN7SKP151-201ENST00000410230 316 ntBASIC6.41□□□□□ -1.38
HDAC4P56524 RN7SKP144-201ENST00000411108 279 ntBASIC6.41□□□□□ -1.38
HDAC4P56524 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.41□□□□□ -1.38
HDAC4P56524 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.41□□□□□ -1.38
HDAC4P56524 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.41□□□□□ -1.38
HDAC4P56524 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC4P56524 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.41□□□□□ -1.38
HDAC4P56524 AC092865.3-201ENST00000425390 1026 ntBASIC6.41□□□□□ -1.38
HDAC4P56524 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC4P56524 BTBD7P2-201ENST00000441962 620 ntBASIC6.41□□□□□ -1.38
HDAC4P56524 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms