Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDH13P55290 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDH13P55290 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDH13P55290 AC007068.1-201ENST00000396690 844 ntBASIC5.88□□□□□ -1.47
CDH13P55290 RN7SKP166-201ENST00000410812 305 ntBASIC5.88□□□□□ -1.47
CDH13P55290 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.88□□□□□ -1.47
CDH13P55290 VN1R20P-201ENST00000425215 966 ntBASIC5.88□□□□□ -1.47
CDH13P55290 AL590399.2-201ENST00000427536 309 ntBASIC5.88□□□□□ -1.47
CDH13P55290 AL590399.4-201ENST00000436561 601 ntBASIC5.88□□□□□ -1.47
CDH13P55290 ZNF619P1-201ENST00000446539 752 ntBASIC5.88□□□□□ -1.47
CDH13P55290 AC016687.1-201ENST00000482574 353 ntBASIC5.88□□□□□ -1.47
CDH13P55290 TRBV5-2-201ENST00000489095 273 ntBASIC5.88□□□□□ -1.47
CDH13P55290 AC138409.2-202ENST00000507274 458 ntBASIC5.88□□□□□ -1.47
CDH13P55290 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.88□□□□□ -1.47
CDH13P55290 RN7SKP288-201ENST00000516227 268 ntBASIC5.88□□□□□ -1.47
CDH13P55290 OR5D2P-201ENST00000524390 911 ntBASIC5.88□□□□□ -1.47
CDH13P55290 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.88□□□□□ -1.47
CDH13P55290 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDH13P55290 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH13P55290 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.88□□□□□ -1.47
CDH13P55290 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH13P55290 NPM1P42-201ENST00000560329 862 ntBASIC5.88□□□□□ -1.47
CDH13P55290 AC083837.1-201ENST00000565297 2994 ntBASIC5.88□□□□□ -1.47
CDH13P55290 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH13P55290 AC119403.2-201ENST00000590960 598 ntBASIC5.88□□□□□ -1.47
CDH13P55290 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.88□□□□□ -1.47
CDH13P55290 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH13P55290 AP001823.1-201ENST00000604056 1003 ntBASIC5.88□□□□□ -1.47
CDH13P55290 AC011891.2-201ENST00000604949 397 ntBASIC5.88□□□□□ -1.47
CDH13P55290 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.88□□□□□ -1.47
CDH13P55290 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.88□□□□□ -1.47
CDH13P55290 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH13P55290 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CDH13P55290 AL592429.1-201ENST00000403909 1473 ntBASIC5.88□□□□□ -1.47
CDH13P55290 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH13P55290 WDR95P-201ENST00000425638 1542 ntBASIC5.88□□□□□ -1.47
CDH13P55290 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH13P55290 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH13P55290 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.88□□□□□ -1.47
CDH13P55290 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH13P55290 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CDH13P55290 AL355834.1-201ENST00000556602 3965 ntBASIC5.88□□□□□ -1.47
CDH13P55290 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH13P55290 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
CDH13P55290 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH13P55290 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CDH13P55290 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDH13P55290 AC005224.3-201ENST00000584683 2140 ntBASIC5.87□□□□□ -1.47
CDH13P55290 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.87□□□□□ -1.47
CDH13P55290 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CDH13P55290 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CDH13P55290 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CDH13P55290 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH13P55290 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CDH13P55290 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.87□□□□□ -1.47
CDH13P55290 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH13P55290 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CDH13P55290 OR10R3P-201ENST00000361688 942 ntBASIC5.87□□□□□ -1.47
CDH13P55290 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH13P55290 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDH13P55290 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CDH13P55290 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.87□□□□□ -1.47
CDH13P55290 RNA5SP156-201ENST00000410250 110 ntBASIC5.87□□□□□ -1.47
CDH13P55290 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.87□□□□□ -1.47
CDH13P55290 AL590004.3-202ENST00000445883 451 ntBASIC5.87□□□□□ -1.47
CDH13P55290 RPS18P1-201ENST00000447840 458 ntBASIC5.87□□□□□ -1.47
CDH13P55290 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDH13P55290 SDC4P-201ENST00000453285 601 ntBASIC5.87□□□□□ -1.47
CDH13P55290 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH13P55290 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH13P55290 AC138517.1-201ENST00000515724 568 ntBASIC5.87□□□□□ -1.47
CDH13P55290 SNORA74.1-201ENST00000516320 180 ntBASIC5.87□□□□□ -1.47
CDH13P55290 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.87□□□□□ -1.47
CDH13P55290 AC036111.2-201ENST00000533247 901 ntBASIC5.87□□□□□ -1.47
CDH13P55290 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH13P55290 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.87□□□□□ -1.47
CDH13P55290 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.87□□□□□ -1.47
CDH13P55290 AC020915.5-201ENST00000596836 964 ntBASIC5.87□□□□□ -1.47
CDH13P55290 AC022001.1-201ENST00000605193 268 ntBASIC5.87□□□□□ -1.47
CDH13P55290 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH13P55290 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH13P55290 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH13P55290 KYNUP3-201ENST00000574386 1341 ntBASIC5.87□□□□□ -1.47
CDH13P55290 AC005261.2-201ENST00000593427 4258 ntBASIC5.87□□□□□ -1.47
CDH13P55290 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDH13P55290 AC025470.1-201ENST00000510053 2032 ntBASIC5.87□□□□□ -1.47
CDH13P55290 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH13P55290 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH13P55290 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDH13P55290 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH13P55290 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH13P55290 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH13P55290 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH13P55290 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CDH13P55290 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CDH13P55290 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
CDH13P55290 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
CDH13P55290 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH13P55290 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
CDH13P55290 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms