Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDH4P55283 RNA5SP271-201ENST00000516700 88 ntBASIC6.11□□□□□ -1.43
CDH4P55283 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH4P55283 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.11□□□□□ -1.43
CDH4P55283 PCNAP4-201ENST00000532690 730 ntBASIC6.11□□□□□ -1.43
CDH4P55283 AC068305.2-201ENST00000550567 1205 ntBASIC6.11□□□□□ -1.43
CDH4P55283 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH4P55283 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH4P55283 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.11□□□□□ -1.43
CDH4P55283 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH4P55283 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.11□□□□□ -1.43
CDH4P55283 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH4P55283 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CDH4P55283 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDH4P55283 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CDH4P55283 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDH4P55283 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDH4P55283 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDH4P55283 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CDH4P55283 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CDH4P55283 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CDH4P55283 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.1□□□□□ -1.43
CDH4P55283 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDH4P55283 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.1□□□□□ -1.43
CDH4P55283 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CDH4P55283 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDH4P55283 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDH4P55283 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDH4P55283 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.1□□□□□ -1.43
CDH4P55283 AP000432.2-201ENST00000624164 2048 ntBASIC6.1□□□□□ -1.43
CDH4P55283 DNM1P47-203ENST00000571780 12667 ntBASIC6.1□□□□□ -1.43
CDH4P55283 AL117378.2-201ENST00000622916 1337 ntBASIC6.1□□□□□ -1.43
CDH4P55283 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
CDH4P55283 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDH4P55283 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
CDH4P55283 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDH4P55283 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CDH4P55283 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6.1□□□□□ -1.43
CDH4P55283 RNA5SP251-201ENST00000410614 137 ntBASIC6.1□□□□□ -1.43
CDH4P55283 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.1□□□□□ -1.43
CDH4P55283 RPS4XP5-201ENST00000419038 768 ntBASIC6.1□□□□□ -1.43
CDH4P55283 AL035660.1-201ENST00000422041 222 ntBASIC6.1□□□□□ -1.43
CDH4P55283 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.1□□□□□ -1.43
CDH4P55283 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CDH4P55283 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.1□□□□□ -1.43
CDH4P55283 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.1□□□□□ -1.43
CDH4P55283 HLA-DPA3-207ENST00000454398 229 ntBASIC6.1□□□□□ -1.43
CDH4P55283 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDH4P55283 AP000648.1-201ENST00000529682 397 ntBASIC6.1□□□□□ -1.43
CDH4P55283 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.1□□□□□ -1.43
CDH4P55283 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.1□□□□□ -1.43
CDH4P55283 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.1□□□□□ -1.43
CDH4P55283 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.1□□□□□ -1.43
CDH4P55283 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.1□□□□□ -1.43
CDH4P55283 AL049779.3-201ENST00000557141 606 ntBASIC6.1□□□□□ -1.43
CDH4P55283 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.1□□□□□ -1.43
CDH4P55283 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDH4P55283 AL583832.1-201ENST00000603227 784 ntBASIC6.1□□□□□ -1.43
CDH4P55283 AL049840.6-201ENST00000604583 345 ntBASIC6.1□□□□□ -1.43
CDH4P55283 AL031601.1-201ENST00000605702 394 ntBASIC6.1□□□□□ -1.43
CDH4P55283 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.1□□□□□ -1.43
CDH4P55283 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.1□□□□□ -1.43
CDH4P55283 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CDH4P55283 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.1□□□□□ -1.43
CDH4P55283 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CDH4P55283 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDH4P55283 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDH4P55283 TTC41P-205ENST00000551270 3963 ntBASIC6.1□□□□□ -1.43
CDH4P55283 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.1□□□□□ -1.43
CDH4P55283 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CDH4P55283 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDH4P55283 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDH4P55283 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH4P55283 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH4P55283 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH4P55283 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH4P55283 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH4P55283 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH4P55283 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH4P55283 TMSB4XP2-201ENST00000335179 210 ntBASIC6.09□□□□□ -1.43
CDH4P55283 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH4P55283 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH4P55283 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH4P55283 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH4P55283 MIR1203-201ENST00000408812 85 ntBASIC6.09□□□□□ -1.43
CDH4P55283 CDY8P-201ENST00000428380 1279 ntBASIC6.09□□□□□ -1.43
CDH4P55283 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH4P55283 AC079807.1-201ENST00000429993 481 ntBASIC6.09□□□□□ -1.43
CDH4P55283 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.09□□□□□ -1.43
CDH4P55283 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.09□□□□□ -1.43
CDH4P55283 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.09□□□□□ -1.43
CDH4P55283 CDY20P-201ENST00000447528 1279 ntBASIC6.09□□□□□ -1.43
CDH4P55283 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.09□□□□□ -1.43
CDH4P55283 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.09□□□□□ -1.43
CDH4P55283 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.09□□□□□ -1.43
CDH4P55283 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.09□□□□□ -1.43
CDH4P55283 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.09□□□□□ -1.43
CDH4P55283 AP004609.2-201ENST00000532177 190 ntBASIC6.09□□□□□ -1.43
CDH4P55283 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH4P55283 AL356801.1-201ENST00000559320 294 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms