Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.55□□□□□ -1.36
COPAP53621 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.55□□□□□ -1.36
COPAP53621 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
COPAP53621 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COPAP53621 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COPAP53621 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
COPAP53621 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COPAP53621 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.54□□□□□ -1.36
COPAP53621 AC023245.2-201ENST00000530760 2978 ntBASIC6.54□□□□□ -1.36
COPAP53621 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COPAP53621 AC005225.5-201ENST00000623547 2225 ntBASIC6.54□□□□□ -1.36
COPAP53621 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.54□□□□□ -1.36
COPAP53621 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COPAP53621 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COPAP53621 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COPAP53621 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.54□□□□□ -1.36
COPAP53621 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COPAP53621 RNA5SP433-201ENST00000364491 114 ntBASIC6.54□□□□□ -1.36
COPAP53621 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.54□□□□□ -1.36
COPAP53621 GCNT1P4-201ENST00000404096 329 ntBASIC6.54□□□□□ -1.36
COPAP53621 VN1R31P-201ENST00000417498 730 ntBASIC6.54□□□□□ -1.36
COPAP53621 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.54□□□□□ -1.36
COPAP53621 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.54□□□□□ -1.36
COPAP53621 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
COPAP53621 AC092865.3-201ENST00000425390 1026 ntBASIC6.54□□□□□ -1.36
COPAP53621 NPM1P26-201ENST00000426339 738 ntBASIC6.54□□□□□ -1.36
COPAP53621 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COPAP53621 H3F3BP1-201ENST00000440551 403 ntBASIC6.54□□□□□ -1.36
COPAP53621 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.54□□□□□ -1.36
COPAP53621 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COPAP53621 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.54□□□□□ -1.36
COPAP53621 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC6.54□□□□□ -1.36
COPAP53621 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.54□□□□□ -1.36
COPAP53621 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.54□□□□□ -1.36
COPAP53621 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.54□□□□□ -1.36
COPAP53621 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.54□□□□□ -1.36
COPAP53621 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.54□□□□□ -1.36
COPAP53621 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.54□□□□□ -1.36
COPAP53621 AP001804.1-201ENST00000526868 919 ntBASIC6.54□□□□□ -1.36
COPAP53621 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.54□□□□□ -1.36
COPAP53621 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.54□□□□□ -1.36
COPAP53621 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.54□□□□□ -1.36
COPAP53621 RN7SL475P-201ENST00000583379 298 ntBASIC6.54□□□□□ -1.36
COPAP53621 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.54□□□□□ -1.36
COPAP53621 AC079315.1-201ENST00000602952 623 ntBASIC6.54□□□□□ -1.36
COPAP53621 BNIP3P35-201ENST00000604530 490 ntBASIC6.54□□□□□ -1.36
COPAP53621 AC073046.2-201ENST00000604756 527 ntBASIC6.54□□□□□ -1.36
COPAP53621 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COPAP53621 MIR6811-201ENST00000620409 58 ntBASIC6.54□□□□□ -1.36
COPAP53621 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.54□□□□□ -1.36
COPAP53621 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.54□□□□□ -1.36
COPAP53621 AL357140.4-201ENST00000636827 412 ntBASIC6.54□□□□□ -1.36
COPAP53621 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.54□□□□□ -1.36
COPAP53621 HSPD1P8-201ENST00000400121 1658 ntBASIC6.54□□□□□ -1.36
COPAP53621 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
COPAP53621 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.54□□□□□ -1.36
COPAP53621 AC112255.1-201ENST00000624070 2493 ntBASIC6.54□□□□□ -1.36
COPAP53621 AC007842.1-201ENST00000597336 2039 ntBASIC6.54□□□□□ -1.36
COPAP53621 AC007159.1-201ENST00000566529 4706 ntBASIC6.54□□□□□ -1.36
COPAP53621 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COPAP53621 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.53□□□□□ -1.36
COPAP53621 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COPAP53621 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.53□□□□□ -1.36
COPAP53621 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.53□□□□□ -1.36
COPAP53621 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.53□□□□□ -1.36
COPAP53621 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COPAP53621 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.53□□□□□ -1.36
COPAP53621 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COPAP53621 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.53□□□□□ -1.36
COPAP53621 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.53□□□□□ -1.36
COPAP53621 SNORA70.9-201ENST00000384370 135 ntBASIC6.53□□□□□ -1.36
COPAP53621 AL157702.1-201ENST00000398764 426 ntBASIC6.53□□□□□ -1.36
COPAP53621 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.53□□□□□ -1.36
COPAP53621 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.53□□□□□ -1.36
COPAP53621 RNF19BPX-201ENST00000426224 625 ntBASIC6.53□□□□□ -1.36
COPAP53621 AC115283.1-201ENST00000427353 400 ntBASIC6.53□□□□□ -1.36
COPAP53621 KCTD9P1-201ENST00000430462 1167 ntBASIC6.53□□□□□ -1.36
COPAP53621 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.53□□□□□ -1.36
COPAP53621 HSFY7P-201ENST00000432672 318 ntBASIC6.53□□□□□ -1.36
COPAP53621 HSFY8P-201ENST00000437934 318 ntBASIC6.53□□□□□ -1.36
COPAP53621 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.53□□□□□ -1.36
COPAP53621 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.53□□□□□ -1.36
COPAP53621 RPL5P7-201ENST00000444235 813 ntBASIC6.53□□□□□ -1.36
COPAP53621 HMGB1P7-201ENST00000450921 612 ntBASIC6.53□□□□□ -1.36
COPAP53621 HSFY5P-201ENST00000453726 309 ntBASIC6.53□□□□□ -1.36
COPAP53621 RN7SL254P-201ENST00000460609 284 ntBASIC6.53□□□□□ -1.36
COPAP53621 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.53□□□□□ -1.36
COPAP53621 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.53□□□□□ -1.36
COPAP53621 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COPAP53621 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.53□□□□□ -1.36
COPAP53621 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COPAP53621 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.53□□□□□ -1.36
COPAP53621 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.53□□□□□ -1.36
COPAP53621 AC002310.3-201ENST00000569728 723 ntBASIC6.53□□□□□ -1.36
COPAP53621 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.53□□□□□ -1.36
COPAP53621 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.53□□□□□ -1.36
COPAP53621 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.53□□□□□ -1.36
COPAP53621 BUB1P1-201ENST00000603541 607 ntBASIC6.53□□□□□ -1.36
COPAP53621 AL157899.1-201ENST00000604110 936 ntBASIC6.53□□□□□ -1.36
COPAP53621 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms