Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HTTP42858 KCTD10P1-201ENST00000434203 625 ntBASIC6.16□□□□□ -1.42
HTTP42858 RPL23AP72-201ENST00000492447 435 ntBASIC6.16□□□□□ -1.42
HTTP42858 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.16□□□□□ -1.42
HTTP42858 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HTTP42858 AC073575.2-201ENST00000614212 627 ntBASIC6.16□□□□□ -1.42
HTTP42858 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC6.16□□□□□ -1.42
HTTP42858 WDR31-201ENST00000341761 4862 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
HTTP42858 WDR31-202ENST00000374193 4878 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HTTP42858 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HTTP42858 ZNF250-201ENST00000292579 6364 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
HTTP42858 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HTTP42858 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
HTTP42858 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.16□□□□□ -1.42
HTTP42858 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HTTP42858 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
HTTP42858 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HTTP42858 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HTTP42858 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HTTP42858 KALRN-201ENST00000240874 6537 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HTTP42858 KALRN-211ENST00000460856 6509 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HTTP42858 RN7SKP95-201ENST00000362860 303 ntBASIC6.15□□□□□ -1.42
HTTP42858 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HTTP42858 AC211486.3-201ENST00000412694 621 ntBASIC6.15□□□□□ -1.42
HTTP42858 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.15□□□□□ -1.42
HTTP42858 TDGF1P1-201ENST00000445734 527 ntBASIC6.15□□□□□ -1.42
HTTP42858 AC034236.1-201ENST00000469891 373 ntBASIC6.15□□□□□ -1.42
HTTP42858 AC105384.2-201ENST00000508433 640 ntBASIC6.15□□□□□ -1.42
HTTP42858 HMGB1P44-201ENST00000508597 572 ntBASIC6.15□□□□□ -1.42
HTTP42858 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.15□□□□□ -1.42
HTTP42858 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.15□□□□□ -1.42
HTTP42858 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC6.15□□□□□ -1.42
HTTP42858 AC009117.1-201ENST00000563948 554 ntBASIC6.15□□□□□ -1.42
HTTP42858 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HTTP42858 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.15□□□□□ -1.42
HTTP42858 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HTTP42858 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.15□□□□□ -1.42
HTTP42858 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HTTP42858 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.15□□□□□ -1.42
HTTP42858 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HTTP42858 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.15□□□□□ -1.42
HTTP42858 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HTTP42858 PDE6A-201ENST00000255266 5642 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HTTP42858 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
HTTP42858 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.15□□□□□ -1.42
HTTP42858 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HTTP42858 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.15□□□□□ -1.43
HTTP42858 OR13K1P-201ENST00000444577 975 ntBASIC6.15□□□□□ -1.43
HTTP42858 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.15□□□□□ -1.43
HTTP42858 AC044797.1-201ENST00000445744 679 ntBASIC6.15□□□□□ -1.43
HTTP42858 AC009127.1-201ENST00000467090 155 ntBASIC6.15□□□□□ -1.43
HTTP42858 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC6.15□□□□□ -1.43
HTTP42858 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.15□□□□□ -1.43
HTTP42858 ZNF969P-201ENST00000510345 2341 ntBASIC6.15□□□□□ -1.43
HTTP42858 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC6.15□□□□□ -1.43
HTTP42858 IGF1R-201ENST00000268035 11803 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
HTTP42858 SCO1-201ENST00000255390 9612 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HTTP42858 UNC5C-201ENST00000453304 9875 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HTTP42858 ZKSCAN1-205ENST00000535170 8758 ntTSL 2 BASIC6.15□□□□□ -1.43
HTTP42858 MYLK-205ENST00000360772 10027 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.43
HTTP42858 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HTTP42858 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC6.15□□□□□ -1.43
HTTP42858 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.15□□□□□ -1.43
HTTP42858 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
HTTP42858 AC007161.1-204ENST00000423039 460 ntBASIC6.14□□□□□ -1.43
HTTP42858 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC6.14□□□□□ -1.43
HTTP42858 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HTTP42858 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC6.14□□□□□ -1.43
HTTP42858 snoU13.20-201ENST00000459180 104 ntBASIC6.14□□□□□ -1.43
HTTP42858 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.14□□□□□ -1.43
HTTP42858 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.14□□□□□ -1.43
HTTP42858 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HTTP42858 AC233699.1-201ENST00000569955 1168 ntBASIC6.14□□□□□ -1.43
HTTP42858 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HTTP42858 TNC-203ENST00000423613 6281 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HTTP42858 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
HTTP42858 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HTTP42858 CASC15-203ENST00000605917 4461 ntBASIC6.14□□□□□ -1.43
HTTP42858 AC096775.1-201ENST00000437724 448 ntBASIC6.14□□□□□ -1.43
HTTP42858 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.14□□□□□ -1.43
HTTP42858 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.14□□□□□ -1.43
HTTP42858 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.14□□□□□ -1.43
HTTP42858 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HTTP42858 TOMM20P2-201ENST00000540082 421 ntBASIC6.14□□□□□ -1.43
HTTP42858 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.14□□□□□ -1.43
HTTP42858 AL513327.3-201ENST00000602618 469 ntBASIC6.14□□□□□ -1.43
HTTP42858 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.14□□□□□ -1.43
HTTP42858 DMBT1-202ENST00000338354 7686 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
HTTP42858 DMBT1-204ENST00000368909 7686 ntAPPRIS P4 TSL 5 BASIC6.14□□□□□ -1.43
HTTP42858 DMBT1-207ENST00000619379 7686 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
HTTP42858 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.14□□□□□ -1.43
HTTP42858 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.14□□□□□ -1.43
HTTP42858 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HTTP42858 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC6.14□□□□□ -1.43
HTTP42858 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.14□□□□□ -1.43
HTTP42858 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.14□□□□□ -1.43
HTTP42858 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.14□□□□□ -1.43
HTTP42858 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.14□□□□□ -1.43
HTTP42858 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HTTP42858 RPL5P25-201ENST00000441148 775 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms