Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SHMT2P34897 AC025470.1-201ENST00000510053 2032 ntBASIC5.86□□□□□ -1.47
SHMT2P34897 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHMT2P34897 AL049634.1-201ENST00000453770 1720 ntBASIC5.86□□□□□ -1.47
SHMT2P34897 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHMT2P34897 KYNUP3-201ENST00000574386 1341 ntBASIC5.86□□□□□ -1.47
SHMT2P34897 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHMT2P34897 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHMT2P34897 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHMT2P34897 RN7SKP275-201ENST00000364626 301 ntBASIC5.86□□□□□ -1.47
SHMT2P34897 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.86□□□□□ -1.47
SHMT2P34897 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHMT2P34897 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.86□□□□□ -1.47
SHMT2P34897 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.86□□□□□ -1.47
SHMT2P34897 NME1P1-201ENST00000420914 382 ntBASIC5.86□□□□□ -1.47
SHMT2P34897 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.86□□□□□ -1.47
SHMT2P34897 AC016027.5-201ENST00000427227 210 ntBASIC5.86□□□□□ -1.47
SHMT2P34897 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.86□□□□□ -1.47
SHMT2P34897 AL138899.2-201ENST00000439139 499 ntBASIC5.86□□□□□ -1.47
SHMT2P34897 AL390879.1-201ENST00000439143 386 ntBASIC5.86□□□□□ -1.47
SHMT2P34897 AL445466.1-201ENST00000448432 357 ntBASIC5.86□□□□□ -1.47
SHMT2P34897 AC008429.4-201ENST00000521201 182 ntBASIC5.86□□□□□ -1.47
SHMT2P34897 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.86□□□□□ -1.47
SHMT2P34897 AC027369.2-201ENST00000528030 440 ntBASIC5.86□□□□□ -1.47
SHMT2P34897 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.86□□□□□ -1.47
SHMT2P34897 AC079905.1-201ENST00000549280 475 ntBASIC5.86□□□□□ -1.47
SHMT2P34897 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.86□□□□□ -1.47
SHMT2P34897 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.86□□□□□ -1.47
SHMT2P34897 AL136097.3-201ENST00000611097 505 ntBASIC5.86□□□□□ -1.47
SHMT2P34897 AC024884.1-201ENST00000620583 399 ntBASIC5.86□□□□□ -1.47
SHMT2P34897 AC129778.1-202ENST00000623812 261 ntBASIC5.86□□□□□ -1.47
SHMT2P34897 AL357562.1-201ENST00000624911 609 ntBASIC5.86□□□□□ -1.47
SHMT2P34897 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.86□□□□□ -1.47
SHMT2P34897 AL591379.1-207ENST00000635982 261 ntBASIC5.86□□□□□ -1.47
SHMT2P34897 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.86□□□□□ -1.47
SHMT2P34897 AP001153.1-201ENST00000641024 338 ntBASIC5.86□□□□□ -1.47
SHMT2P34897 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHMT2P34897 DNM1P47-203ENST00000571780 12667 ntBASIC5.86□□□□□ -1.47
SHMT2P34897 AC016583.1-201ENST00000624221 2431 ntBASIC5.86□□□□□ -1.47
SHMT2P34897 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHMT2P34897 AC012254.3-201ENST00000591183 2117 ntBASIC5.86□□□□□ -1.47
SHMT2P34897 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHMT2P34897 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHMT2P34897 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHMT2P34897 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.85□□□□□ -1.47
SHMT2P34897 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
SHMT2P34897 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
SHMT2P34897 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
SHMT2P34897 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHMT2P34897 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.85□□□□□ -1.47
SHMT2P34897 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.85□□□□□ -1.47
SHMT2P34897 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHMT2P34897 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHMT2P34897 RBPJP7-201ENST00000442803 1447 ntBASIC5.85□□□□□ -1.47
SHMT2P34897 RBPJP5-201ENST00000449433 1447 ntBASIC5.85□□□□□ -1.47
SHMT2P34897 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SHMT2P34897 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.85□□□□□ -1.47
SHMT2P34897 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SHMT2P34897 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.85□□□□□ -1.47
SHMT2P34897 SAMMSON-210ENST00000641260 1308 ntBASIC5.85□□□□□ -1.47
SHMT2P34897 OR56A4-201ENST00000330728 1209 ntBASIC5.85□□□□□ -1.47
SHMT2P34897 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SHMT2P34897 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SHMT2P34897 AL121977.1-201ENST00000401636 979 ntBASIC5.85□□□□□ -1.47
SHMT2P34897 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHMT2P34897 RN7SKP166-201ENST00000410812 305 ntBASIC5.85□□□□□ -1.47
SHMT2P34897 PTCD2P2-201ENST00000415579 1095 ntBASIC5.85□□□□□ -1.47
SHMT2P34897 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.85□□□□□ -1.47
SHMT2P34897 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.85□□□□□ -1.47
SHMT2P34897 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.85□□□□□ -1.47
SHMT2P34897 AL590399.4-201ENST00000436561 601 ntBASIC5.85□□□□□ -1.47
SHMT2P34897 AC009963.4-201ENST00000448535 339 ntBASIC5.85□□□□□ -1.47
SHMT2P34897 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.85□□□□□ -1.47
SHMT2P34897 AC017007.3-201ENST00000479865 435 ntBASIC5.85□□□□□ -1.47
SHMT2P34897 RPL23AP40-201ENST00000487630 390 ntBASIC5.85□□□□□ -1.47
SHMT2P34897 AC025458.1-201ENST00000506046 166 ntBASIC5.85□□□□□ -1.47
SHMT2P34897 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.85□□□□□ -1.47
SHMT2P34897 LDHBP3-201ENST00000514909 822 ntBASIC5.85□□□□□ -1.47
SHMT2P34897 SCARNA18.1-201ENST00000516330 83 ntBASIC5.85□□□□□ -1.47
SHMT2P34897 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.85□□□□□ -1.47
SHMT2P34897 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.85□□□□□ -1.47
SHMT2P34897 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.85□□□□□ -1.47
SHMT2P34897 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.85□□□□□ -1.47
SHMT2P34897 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.85□□□□□ -1.47
SHMT2P34897 AP005119.1-201ENST00000580956 292 ntBASIC5.85□□□□□ -1.47
SHMT2P34897 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.85□□□□□ -1.47
SHMT2P34897 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.85□□□□□ -1.47
SHMT2P34897 AP001357.1-201ENST00000586304 1053 ntBASIC5.85□□□□□ -1.47
SHMT2P34897 AC119403.2-201ENST00000590960 598 ntBASIC5.85□□□□□ -1.47
SHMT2P34897 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.85□□□□□ -1.47
SHMT2P34897 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.85□□□□□ -1.47
SHMT2P34897 AC018690.1-201ENST00000608144 626 ntBASIC5.85□□□□□ -1.47
SHMT2P34897 MIR6778-201ENST00000617912 73 ntBASIC5.85□□□□□ -1.47
SHMT2P34897 AC096708.4-201ENST00000620563 552 ntBASIC5.85□□□□□ -1.47
SHMT2P34897 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.85□□□□□ -1.47
SHMT2P34897 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SHMT2P34897 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.85□□□□□ -1.47
SHMT2P34897 AC020656.2-201ENST00000613291 5309 ntBASIC5.85□□□□□ -1.47
SHMT2P34897 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHMT2P34897 BRAFP1-201ENST00000445336 2703 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms