Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC9.27□□□□□ -0.93
CLIP1P30622 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC9.27□□□□□ -0.93
CLIP1P30622 IGKV2-18-201ENST00000522607 343 ntBASIC9.27□□□□□ -0.93
CLIP1P30622 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC9.27□□□□□ -0.93
CLIP1P30622 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
CLIP1P30622 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC9.27□□□□□ -0.93
CLIP1P30622 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC9.27□□□□□ -0.93
CLIP1P30622 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CLIP1P30622 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
CLIP1P30622 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC9.27□□□□□ -0.93
CLIP1P30622 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
CLIP1P30622 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
CLIP1P30622 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
CLIP1P30622 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC9.26□□□□□ -0.93
CLIP1P30622 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
CLIP1P30622 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
CLIP1P30622 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC9.26□□□□□ -0.93
CLIP1P30622 AL355433.1-201ENST00000422804 300 ntBASIC9.26□□□□□ -0.93
CLIP1P30622 AL662874.1-201ENST00000426065 230 ntBASIC9.26□□□□□ -0.93
CLIP1P30622 HMGB3P24-201ENST00000433260 622 ntBASIC9.26□□□□□ -0.93
CLIP1P30622 AC023141.8-201ENST00000442554 208 ntBASIC9.26□□□□□ -0.93
CLIP1P30622 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CLIP1P30622 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC9.26□□□□□ -0.93
CLIP1P30622 RN7SL72P-201ENST00000460697 269 ntBASIC9.26□□□□□ -0.93
CLIP1P30622 TOMM22P4-201ENST00000511318 336 ntBASIC9.26□□□□□ -0.93
CLIP1P30622 MIR2117-201ENST00000516780 80 ntBASIC9.26□□□□□ -0.93
CLIP1P30622 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC9.26□□□□□ -0.93
CLIP1P30622 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
CLIP1P30622 HMGB1P42-201ENST00000532126 553 ntBASIC9.26□□□□□ -0.93
CLIP1P30622 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC9.26□□□□□ -0.93
CLIP1P30622 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC9.26□□□□□ -0.93
CLIP1P30622 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC9.26□□□□□ -0.93
CLIP1P30622 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CLIP1P30622 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
CLIP1P30622 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC9.26□□□□□ -0.93
CLIP1P30622 AC005725.1-201ENST00000577346 2607 ntBASIC9.26□□□□□ -0.93
CLIP1P30622 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CLIP1P30622 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC9.26□□□□□ -0.93
CLIP1P30622 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CLIP1P30622 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
CLIP1P30622 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CLIP1P30622 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC9.25□□□□□ -0.93
CLIP1P30622 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC9.25□□□□□ -0.93
CLIP1P30622 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CLIP1P30622 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC9.25□□□□□ -0.93
CLIP1P30622 RNA5SP30-201ENST00000365552 115 ntBASIC9.25□□□□□ -0.93
CLIP1P30622 MIR130A-201ENST00000385274 89 ntBASIC9.25□□□□□ -0.93
CLIP1P30622 EEF1A1P29-201ENST00000416082 1096 ntBASIC9.25□□□□□ -0.93
CLIP1P30622 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC9.25□□□□□ -0.93
CLIP1P30622 EEF1B2P6-201ENST00000445713 673 ntBASIC9.25□□□□□ -0.93
CLIP1P30622 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC9.25□□□□□ -0.93
CLIP1P30622 AC006539.1-201ENST00000481419 501 ntBASIC9.25□□□□□ -0.93
CLIP1P30622 AC105384.2-201ENST00000508433 640 ntBASIC9.25□□□□□ -0.93
CLIP1P30622 RNU6-615P-201ENST00000516065 106 ntBASIC9.25□□□□□ -0.93
CLIP1P30622 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC9.25□□□□□ -0.93
CLIP1P30622 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC9.25□□□□□ -0.93
CLIP1P30622 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC9.25□□□□□ -0.93
CLIP1P30622 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC9.25□□□□□ -0.93
CLIP1P30622 AC079395.2-201ENST00000610982 737 ntBASIC9.25□□□□□ -0.93
CLIP1P30622 CU639417.4-201ENST00000623928 207 ntBASIC9.25□□□□□ -0.93
CLIP1P30622 AL691477.1-201ENST00000624398 162 ntBASIC9.25□□□□□ -0.93
CLIP1P30622 MVP-219ENST00000629059 120 ntTSL 5 BASIC9.25□□□□□ -0.93
CLIP1P30622 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CLIP1P30622 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC9.25□□□□□ -0.93
CLIP1P30622 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC9.25□□□□□ -0.93
CLIP1P30622 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CLIP1P30622 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC9.24□□□□□ -0.93
CLIP1P30622 MIR937-201ENST00000401271 86 ntBASIC9.24□□□□□ -0.93
CLIP1P30622 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC9.24□□□□□ -0.93
CLIP1P30622 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC9.24□□□□□ -0.93
CLIP1P30622 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC9.24□□□□□ -0.93
CLIP1P30622 AC096775.1-201ENST00000437724 448 ntBASIC9.24□□□□□ -0.93
CLIP1P30622 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC9.24□□□□□ -0.93
CLIP1P30622 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC9.24□□□□□ -0.93
CLIP1P30622 RN7SL799P-201ENST00000475891 298 ntBASIC9.24□□□□□ -0.93
CLIP1P30622 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC9.24□□□□□ -0.93
CLIP1P30622 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC9.24□□□□□ -0.93
CLIP1P30622 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC9.24□□□□□ -0.93
CLIP1P30622 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC9.24□□□□□ -0.93
CLIP1P30622 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC9.24□□□□□ -0.93
CLIP1P30622 AL021707.7-201ENST00000607991 416 ntBASIC9.24□□□□□ -0.93
CLIP1P30622 Z83820.1-201ENST00000456978 1499 ntBASIC9.24□□□□□ -0.93
CLIP1P30622 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CLIP1P30622 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CLIP1P30622 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
CLIP1P30622 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC9.24□□□□□ -0.93
CLIP1P30622 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CLIP1P30622 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC9.24□□□□□ -0.93
CLIP1P30622 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
CLIP1P30622 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CLIP1P30622 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
CLIP1P30622 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
CLIP1P30622 GTF2IP4-201ENST00000453092 2054 ntBASIC9.24□□□□□ -0.93
CLIP1P30622 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CLIP1P30622 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
CLIP1P30622 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
CLIP1P30622 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC9.23□□□□□ -0.93
CLIP1P30622 NENFP1-201ENST00000419476 466 ntBASIC9.23□□□□□ -0.93
CLIP1P30622 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC9.23□□□□□ -0.93
CLIP1P30622 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms