Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC8.41□□□□□ -1.06
RXRBP28702 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RXRBP28702 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
RXRBP28702 AC011592.1-201ENST00000624647 3634 ntBASIC8.41□□□□□ -1.06
RXRBP28702 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
RXRBP28702 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
RXRBP28702 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
RXRBP28702 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RXRBP28702 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RXRBP28702 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RXRBP28702 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RXRBP28702 PABPC1P6-201ENST00000445594 1829 ntBASIC8.4□□□□□ -1.06
RXRBP28702 AC023421.1-201ENST00000590535 1785 ntBASIC8.4□□□□□ -1.06
RXRBP28702 ARHGAP42P5-201ENST00000548856 2936 ntBASIC8.4□□□□□ -1.06
RXRBP28702 AC011416.1-201ENST00000514947 1732 ntBASIC8.4□□□□□ -1.06
RXRBP28702 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
RXRBP28702 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RXRBP28702 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC8.4□□□□□ -1.06
RXRBP28702 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RXRBP28702 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RXRBP28702 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RXRBP28702 AP002530.1-201ENST00000405705 684 ntBASIC8.4□□□□□ -1.06
RXRBP28702 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC8.4□□□□□ -1.06
RXRBP28702 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC8.4□□□□□ -1.06
RXRBP28702 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC8.4□□□□□ -1.06
RXRBP28702 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC8.4□□□□□ -1.06
RXRBP28702 AC008753.1-201ENST00000423096 284 ntBASIC8.4□□□□□ -1.06
RXRBP28702 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC8.4□□□□□ -1.06
RXRBP28702 UBE2D3P3-201ENST00000426992 425 ntBASIC8.4□□□□□ -1.06
RXRBP28702 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC8.4□□□□□ -1.06
RXRBP28702 NDUFA5P1-201ENST00000433858 341 ntBASIC8.4□□□□□ -1.06
RXRBP28702 FTH1P20-201ENST00000434913 548 ntBASIC8.4□□□□□ -1.06
RXRBP28702 AL512593.1-201ENST00000444758 779 ntBASIC8.4□□□□□ -1.06
RXRBP28702 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC8.4□□□□□ -1.06
RXRBP28702 ZNF886P-201ENST00000450781 723 ntBASIC8.4□□□□□ -1.06
RXRBP28702 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC8.4□□□□□ -1.06
RXRBP28702 HGF-207ENST00000453018 721 ntTSL 3 BASIC8.4□□□□□ -1.06
RXRBP28702 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC8.4□□□□□ -1.06
RXRBP28702 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC8.4□□□□□ -1.06
RXRBP28702 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RXRBP28702 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC8.4□□□□□ -1.06
RXRBP28702 SNORA70.20-201ENST00000516848 126 ntBASIC8.4□□□□□ -1.06
RXRBP28702 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC8.4□□□□□ -1.06
RXRBP28702 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC8.4□□□□□ -1.06
RXRBP28702 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC8.4□□□□□ -1.06
RXRBP28702 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
RXRBP28702 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC8.4□□□□□ -1.06
RXRBP28702 CR383656.6-201ENST00000550518 394 ntBASIC8.4□□□□□ -1.06
RXRBP28702 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC8.4□□□□□ -1.06
RXRBP28702 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC8.4□□□□□ -1.06
RXRBP28702 GAS5-AS1-201ENST00000602767 694 ntBASIC8.4□□□□□ -1.06
RXRBP28702 HOTTIP_3.1-201ENST00000619957 337 ntBASIC8.4□□□□□ -1.06
RXRBP28702 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC8.4□□□□□ -1.06
RXRBP28702 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC8.4□□□□□ -1.06
RXRBP28702 AC034111.1-201ENST00000562143 3770 ntBASIC8.4□□□□□ -1.06
RXRBP28702 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC8.4□□□□□ -1.06
RXRBP28702 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC8.4□□□□□ -1.06
RXRBP28702 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RXRBP28702 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC8.4□□□□□ -1.06
RXRBP28702 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
RXRBP28702 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC8.4□□□□□ -1.07
RXRBP28702 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC8.4□□□□□ -1.07
RXRBP28702 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
RXRBP28702 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC8.4□□□□□ -1.07
RXRBP28702 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC8.39□□□□□ -1.07
RXRBP28702 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
RXRBP28702 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
RXRBP28702 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
RXRBP28702 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RXRBP28702 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RXRBP28702 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
RXRBP28702 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
RXRBP28702 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
RXRBP28702 SNORA64.1-201ENST00000362600 132 ntBASIC8.39□□□□□ -1.07
RXRBP28702 RNA5SP507-201ENST00000363603 121 ntBASIC8.39□□□□□ -1.07
RXRBP28702 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC8.39□□□□□ -1.07
RXRBP28702 SNORD116-8-201ENST00000384365 95 ntBASIC8.39□□□□□ -1.07
RXRBP28702 AL132875.1-201ENST00000403623 949 ntBASIC8.39□□□□□ -1.07
RXRBP28702 AL354890.1-201ENST00000413730 346 ntBASIC8.39□□□□□ -1.07
RXRBP28702 AL139128.1-201ENST00000413921 941 ntBASIC8.39□□□□□ -1.07
RXRBP28702 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC8.39□□□□□ -1.07
RXRBP28702 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC8.39□□□□□ -1.07
RXRBP28702 AC073464.3-201ENST00000422564 712 ntBASIC8.39□□□□□ -1.07
RXRBP28702 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC8.39□□□□□ -1.07
RXRBP28702 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC8.39□□□□□ -1.07
RXRBP28702 RPS6P15-201ENST00000431996 751 ntBASIC8.39□□□□□ -1.07
RXRBP28702 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC8.39□□□□□ -1.07
RXRBP28702 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC8.39□□□□□ -1.07
RXRBP28702 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC8.39□□□□□ -1.07
RXRBP28702 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC8.39□□□□□ -1.07
RXRBP28702 AL034399.1-201ENST00000451535 380 ntBASIC8.39□□□□□ -1.07
RXRBP28702 RSU1P1-201ENST00000453416 441 ntBASIC8.39□□□□□ -1.07
RXRBP28702 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RXRBP28702 AC091153.1-201ENST00000466297 402 ntBASIC8.39□□□□□ -1.07
RXRBP28702 OR2AO1P-201ENST00000476497 403 ntBASIC8.39□□□□□ -1.07
RXRBP28702 RAP1BP2-201ENST00000478270 544 ntBASIC8.39□□□□□ -1.07
RXRBP28702 AC104982.1-201ENST00000478775 574 ntBASIC8.39□□□□□ -1.07
RXRBP28702 RN7SL808P-201ENST00000496066 299 ntBASIC8.39□□□□□ -1.07
RXRBP28702 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC8.39□□□□□ -1.07
RXRBP28702 LAMTOR3P2-201ENST00000504479 232 ntBASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms