Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.57□□□□□ -1.68
HLA-DMBP28068 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 AL590399.2-201ENST00000427536 309 ntBASIC4.57□□□□□ -1.68
HLA-DMBP28068 RPL5P2-201ENST00000429598 854 ntBASIC4.57□□□□□ -1.68
HLA-DMBP28068 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 AL645936.1-201ENST00000441979 518 ntBASIC4.57□□□□□ -1.68
HLA-DMBP28068 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 RPL5P10-201ENST00000445207 894 ntBASIC4.57□□□□□ -1.68
HLA-DMBP28068 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 ZNF619P1-201ENST00000446539 752 ntBASIC4.57□□□□□ -1.68
HLA-DMBP28068 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 RN7SL254P-201ENST00000460609 284 ntBASIC4.57□□□□□ -1.68
HLA-DMBP28068 AP002453.1-201ENST00000492327 668 ntBASIC4.57□□□□□ -1.68
HLA-DMBP28068 KHDC1P1-201ENST00000511053 508 ntBASIC4.57□□□□□ -1.68
HLA-DMBP28068 TOMM22P4-201ENST00000511318 336 ntBASIC4.57□□□□□ -1.68
HLA-DMBP28068 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DMBP28068 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 AL845552.1-201ENST00000556820 323 ntBASIC4.57□□□□□ -1.68
HLA-DMBP28068 AC026826.3-201ENST00000561747 158 ntBASIC4.57□□□□□ -1.68
HLA-DMBP28068 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 AC002310.3-201ENST00000569728 723 ntBASIC4.57□□□□□ -1.68
HLA-DMBP28068 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DMBP28068 OR1E3-201ENST00000575608 948 ntBASIC4.57□□□□□ -1.68
HLA-DMBP28068 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 RFPL4AP6-201ENST00000616792 846 ntBASIC4.57□□□□□ -1.68
HLA-DMBP28068 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DMBP28068 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DMBP28068 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-DMBP28068 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HLA-DMBP28068 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DMBP28068 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DMBP28068 AC020656.2-201ENST00000613291 5309 ntBASIC4.56□□□□□ -1.68
HLA-DMBP28068 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
HLA-DMBP28068 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DMBP28068 KYNUP3-201ENST00000574386 1341 ntBASIC4.56□□□□□ -1.68
HLA-DMBP28068 AC022325.1-201ENST00000502748 2199 ntBASIC4.56□□□□□ -1.68
HLA-DMBP28068 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DMBP28068 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DMBP28068 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HLA-DMBP28068 OR10R3P-201ENST00000361688 942 ntBASIC4.56□□□□□ -1.68
HLA-DMBP28068 SNORD1C-201ENST00000363315 78 ntBASIC4.56□□□□□ -1.68
HLA-DMBP28068 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HLA-DMBP28068 RN7SKP144-201ENST00000411108 279 ntBASIC4.56□□□□□ -1.68
HLA-DMBP28068 AL096829.1-201ENST00000413677 457 ntBASIC4.56□□□□□ -1.68
HLA-DMBP28068 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DMBP28068 AC009506.2-201ENST00000420635 840 ntBASIC4.56□□□□□ -1.68
HLA-DMBP28068 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DMBP28068 AC092865.3-201ENST00000425390 1026 ntBASIC4.56□□□□□ -1.68
HLA-DMBP28068 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DMBP28068 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DMBP28068 OR3D1P-201ENST00000438288 955 ntBASIC4.56□□□□□ -1.68
HLA-DMBP28068 CUBNP2-201ENST00000443534 1139 ntBASIC4.56□□□□□ -1.68
HLA-DMBP28068 CYCSP51-201ENST00000443545 318 ntBASIC4.56□□□□□ -1.68
HLA-DMBP28068 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DMBP28068 RPL23AP60-201ENST00000450011 454 ntBASIC4.56□□□□□ -1.68
HLA-DMBP28068 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DMBP28068 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DMBP28068 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DMBP28068 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC4.56□□□□□ -1.68
HLA-DMBP28068 CCDC11P1-201ENST00000503137 1162 ntBASIC4.56□□□□□ -1.68
HLA-DMBP28068 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DMBP28068 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DMBP28068 AC095052.1-201ENST00000509955 863 ntBASIC4.56□□□□□ -1.68
HLA-DMBP28068 SNX18P25-201ENST00000510539 758 ntBASIC4.56□□□□□ -1.68
HLA-DMBP28068 SNORA70.11-201ENST00000515987 138 ntBASIC4.56□□□□□ -1.68
HLA-DMBP28068 SNORA70.13-201ENST00000516116 138 ntBASIC4.56□□□□□ -1.68
HLA-DMBP28068 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.56□□□□□ -1.68
HLA-DMBP28068 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.56□□□□□ -1.68
HLA-DMBP28068 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DMBP28068 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DMBP28068 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DMBP28068 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DMBP28068 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DMBP28068 AC006600.2-201ENST00000624834 2506 ntBASIC4.56□□□□□ -1.68
HLA-DMBP28068 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DMBP28068 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DMBP28068 AC139426.3-201ENST00000605648 2059 ntBASIC4.56□□□□□ -1.68
HLA-DMBP28068 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HLA-DMBP28068 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DMBP28068 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
HLA-DMBP28068 AC092070.2-203ENST00000598377 3644 ntBASIC4.56□□□□□ -1.68
HLA-DMBP28068 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
HLA-DMBP28068 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
HLA-DMBP28068 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DMBP28068 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DMBP28068 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DMBP28068 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
HLA-DMBP28068 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms