Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC123767.1-202ENST00000620407 817 ntBASIC7.82□□□□□ -1.16
LIG1P18858 AC096708.4-201ENST00000620563 552 ntBASIC7.82□□□□□ -1.16
LIG1P18858 AC027506.1-201ENST00000621395 198 ntBASIC7.82□□□□□ -1.16
LIG1P18858 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.82□□□□□ -1.16
LIG1P18858 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.82□□□□□ -1.16
LIG1P18858 ICE2P1-201ENST00000512800 1849 ntBASIC7.82□□□□□ -1.16
LIG1P18858 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
LIG1P18858 AC005261.4-201ENST00000600047 1385 ntBASIC7.82□□□□□ -1.16
LIG1P18858 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
LIG1P18858 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
LIG1P18858 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.81□□□□□ -1.16
LIG1P18858 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.81□□□□□ -1.16
LIG1P18858 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
LIG1P18858 AC022034.1-201ENST00000512867 2156 ntBASIC7.81□□□□□ -1.16
LIG1P18858 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LIG1P18858 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
LIG1P18858 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.81□□□□□ -1.16
LIG1P18858 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
LIG1P18858 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
LIG1P18858 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.81□□□□□ -1.16
LIG1P18858 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LIG1P18858 RNU6-1214P-201ENST00000363650 109 ntBASIC7.81□□□□□ -1.16
LIG1P18858 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
LIG1P18858 RN7SKP278-201ENST00000410504 342 ntBASIC7.81□□□□□ -1.16
LIG1P18858 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC7.81□□□□□ -1.16
LIG1P18858 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC7.81□□□□□ -1.16
LIG1P18858 VDAC1P10-201ENST00000416715 891 ntBASIC7.81□□□□□ -1.16
LIG1P18858 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LIG1P18858 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC7.81□□□□□ -1.16
LIG1P18858 AC118469.1-201ENST00000442943 488 ntBASIC7.81□□□□□ -1.16
LIG1P18858 RPS7P4-201ENST00000444127 582 ntBASIC7.81□□□□□ -1.16
LIG1P18858 AC016772.1-201ENST00000444170 1261 ntBASIC7.81□□□□□ -1.16
LIG1P18858 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC7.81□□□□□ -1.16
LIG1P18858 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC7.81□□□□□ -1.16
LIG1P18858 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.81□□□□□ -1.16
LIG1P18858 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LIG1P18858 AC010878.1-201ENST00000456500 1047 ntBASIC7.81□□□□□ -1.16
LIG1P18858 MED28P7-201ENST00000456611 530 ntBASIC7.81□□□□□ -1.16
LIG1P18858 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC7.81□□□□□ -1.16
LIG1P18858 CYCSP20-201ENST00000473154 315 ntBASIC7.81□□□□□ -1.16
LIG1P18858 AC018639.1-201ENST00000492994 442 ntBASIC7.81□□□□□ -1.16
LIG1P18858 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC7.81□□□□□ -1.16
LIG1P18858 AC117532.1-201ENST00000514638 323 ntBASIC7.81□□□□□ -1.16
LIG1P18858 SEC11B-201ENST00000518383 499 ntBASIC7.81□□□□□ -1.16
LIG1P18858 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LIG1P18858 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC7.81□□□□□ -1.16
LIG1P18858 MTCO2P15-201ENST00000532655 656 ntBASIC7.81□□□□□ -1.16
LIG1P18858 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC7.81□□□□□ -1.16
LIG1P18858 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC7.81□□□□□ -1.16
LIG1P18858 NXPE2P1-201ENST00000543705 726 ntBASIC7.81□□□□□ -1.16
LIG1P18858 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC7.81□□□□□ -1.16
LIG1P18858 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC7.81□□□□□ -1.16
LIG1P18858 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC7.81□□□□□ -1.16
LIG1P18858 CTSLP2-201ENST00000580501 394 ntBASIC7.81□□□□□ -1.16
LIG1P18858 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC7.81□□□□□ -1.16
LIG1P18858 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC7.81□□□□□ -1.16
LIG1P18858 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC7.81□□□□□ -1.16
LIG1P18858 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC7.81□□□□□ -1.16
LIG1P18858 AC245100.7-201ENST00000609678 442 ntBASIC7.81□□□□□ -1.16
LIG1P18858 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC7.81□□□□□ -1.16
LIG1P18858 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LIG1P18858 AL049541.2-201ENST00000626377 555 ntBASIC7.81□□□□□ -1.16
LIG1P18858 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.81□□□□□ -1.16
LIG1P18858 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC7.81□□□□□ -1.16
LIG1P18858 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.81□□□□□ -1.16
LIG1P18858 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LIG1P18858 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LIG1P18858 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.81□□□□□ -1.16
LIG1P18858 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
LIG1P18858 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LIG1P18858 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.81□□□□□ -1.16
LIG1P18858 AP000526.1-201ENST00000603308 1388 ntBASIC7.81□□□□□ -1.16
LIG1P18858 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
LIG1P18858 LINC01616-201ENST00000561816 2280 ntBASIC7.81□□□□□ -1.16
LIG1P18858 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.81□□□□□ -1.16
LIG1P18858 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
LIG1P18858 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
LIG1P18858 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
LIG1P18858 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
LIG1P18858 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LIG1P18858 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
LIG1P18858 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LIG1P18858 AC013488.1-201ENST00000526618 1838 ntBASIC7.8□□□□□ -1.16
LIG1P18858 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LIG1P18858 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
LIG1P18858 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
LIG1P18858 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.8□□□□□ -1.16
LIG1P18858 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LIG1P18858 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LIG1P18858 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
LIG1P18858 PDCL3P5-201ENST00000398028 722 ntBASIC7.8□□□□□ -1.16
LIG1P18858 GSTA8P-201ENST00000404253 637 ntBASIC7.8□□□□□ -1.16
LIG1P18858 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.8□□□□□ -1.16
LIG1P18858 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC7.8□□□□□ -1.16
LIG1P18858 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC7.8□□□□□ -1.16
LIG1P18858 NPM1P26-201ENST00000426339 738 ntBASIC7.8□□□□□ -1.16
LIG1P18858 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.8□□□□□ -1.16
LIG1P18858 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LIG1P18858 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC7.8□□□□□ -1.16
LIG1P18858 AC046176.1-201ENST00000435260 1170 ntBASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms