Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AC023141.8-201ENST00000442554 208 ntBASIC5.19□□□□□ -1.58
CTLA4P16410 RPL6P30-201ENST00000443382 862 ntBASIC5.19□□□□□ -1.58
CTLA4P16410 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTLA4P16410 TIMM8BP2-201ENST00000445940 251 ntBASIC5.19□□□□□ -1.58
CTLA4P16410 AC005077.1-201ENST00000449226 375 ntBASIC5.19□□□□□ -1.58
CTLA4P16410 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.19□□□□□ -1.58
CTLA4P16410 GEMIN2P1-201ENST00000454246 752 ntBASIC5.19□□□□□ -1.58
CTLA4P16410 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.19□□□□□ -1.58
CTLA4P16410 AC098847.1-201ENST00000473094 348 ntBASIC5.19□□□□□ -1.58
CTLA4P16410 PDCL3P4-201ENST00000489621 720 ntBASIC5.19□□□□□ -1.58
CTLA4P16410 AC021006.1-201ENST00000489849 553 ntBASIC5.19□□□□□ -1.58
CTLA4P16410 RPL9P15-201ENST00000491096 532 ntBASIC5.19□□□□□ -1.58
CTLA4P16410 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.19□□□□□ -1.58
CTLA4P16410 HSD3BP3-201ENST00000514706 994 ntBASIC5.19□□□□□ -1.58
CTLA4P16410 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.19□□□□□ -1.58
CTLA4P16410 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTLA4P16410 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.19□□□□□ -1.58
CTLA4P16410 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.19□□□□□ -1.58
CTLA4P16410 MIR3154-201ENST00000577829 84 ntBASIC5.19□□□□□ -1.58
CTLA4P16410 AC048341.3-201ENST00000619323 491 ntBASIC5.19□□□□□ -1.58
CTLA4P16410 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.19□□□□□ -1.58
CTLA4P16410 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.19□□□□□ -1.58
CTLA4P16410 MAPK10-261ENST00000641050 3109 ntBASIC5.19□□□□□ -1.58
CTLA4P16410 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTLA4P16410 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTLA4P16410 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CTLA4P16410 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.19□□□□□ -1.58
CTLA4P16410 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTLA4P16410 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.19□□□□□ -1.58
CTLA4P16410 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTLA4P16410 AP002512.4-202ENST00000641599 4530 ntBASIC5.18□□□□□ -1.58
CTLA4P16410 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.18□□□□□ -1.58
CTLA4P16410 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.18□□□□□ -1.58
CTLA4P16410 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.18□□□□□ -1.58
CTLA4P16410 QRSL1P1-201ENST00000400977 1540 ntBASIC5.18□□□□□ -1.58
CTLA4P16410 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.18□□□□□ -1.58
CTLA4P16410 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTLA4P16410 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTLA4P16410 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CTLA4P16410 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CTLA4P16410 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTLA4P16410 RNA5SP91-201ENST00000390902 119 ntBASIC5.18□□□□□ -1.58
CTLA4P16410 RNU6-316P-201ENST00000391027 107 ntBASIC5.18□□□□□ -1.58
CTLA4P16410 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.18□□□□□ -1.58
CTLA4P16410 AL354890.1-201ENST00000413730 346 ntBASIC5.18□□□□□ -1.58
CTLA4P16410 METTL15P3-201ENST00000415522 1221 ntBASIC5.18□□□□□ -1.58
CTLA4P16410 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.18□□□□□ -1.58
CTLA4P16410 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.18□□□□□ -1.58
CTLA4P16410 AC015983.1-201ENST00000441577 373 ntBASIC5.18□□□□□ -1.58
CTLA4P16410 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.18□□□□□ -1.58
CTLA4P16410 EEF1B2P3-201ENST00000447718 678 ntBASIC5.18□□□□□ -1.58
CTLA4P16410 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.18□□□□□ -1.58
CTLA4P16410 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.18□□□□□ -1.58
CTLA4P16410 RNU1-88P-201ENST00000459274 128 ntBASIC5.18□□□□□ -1.58
CTLA4P16410 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.18□□□□□ -1.58
CTLA4P16410 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.18□□□□□ -1.58
CTLA4P16410 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.18□□□□□ -1.58
CTLA4P16410 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.18□□□□□ -1.58
CTLA4P16410 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.18□□□□□ -1.58
CTLA4P16410 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.18□□□□□ -1.58
CTLA4P16410 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.18□□□□□ -1.58
CTLA4P16410 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.18□□□□□ -1.58
CTLA4P16410 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.18□□□□□ -1.58
CTLA4P16410 AC005244.1-201ENST00000582566 339 ntBASIC5.18□□□□□ -1.58
CTLA4P16410 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CTLA4P16410 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.18□□□□□ -1.58
CTLA4P16410 AC091167.5-201ENST00000605689 894 ntBASIC5.18□□□□□ -1.58
CTLA4P16410 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.18□□□□□ -1.58
CTLA4P16410 AL139099.4-201ENST00000614802 114 ntBASIC5.18□□□□□ -1.58
CTLA4P16410 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CTLA4P16410 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CTLA4P16410 AC063952.1-203ENST00000634410 658 ntBASIC5.18□□□□□ -1.58
CTLA4P16410 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.18□□□□□ -1.58
CTLA4P16410 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CTLA4P16410 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.18□□□□□ -1.58
CTLA4P16410 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.18□□□□□ -1.58
CTLA4P16410 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CTLA4P16410 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.18□□□□□ -1.58
CTLA4P16410 AC004076.2-201ENST00000620532 3323 ntBASIC5.18□□□□□ -1.58
CTLA4P16410 AL137141.1-201ENST00000624622 4836 ntBASIC5.18□□□□□ -1.58
CTLA4P16410 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTLA4P16410 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTLA4P16410 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC5.18□□□□□ -1.58
CTLA4P16410 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CTLA4P16410 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTLA4P16410 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTLA4P16410 AL158152.1-201ENST00000602652 1435 ntBASIC5.17□□□□□ -1.58
CTLA4P16410 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTLA4P16410 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.17□□□□□ -1.58
CTLA4P16410 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.17□□□□□ -1.58
CTLA4P16410 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTLA4P16410 RNFT1P3-201ENST00000340898 1052 ntBASIC5.17□□□□□ -1.58
CTLA4P16410 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTLA4P16410 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CTLA4P16410 AC016739.1-201ENST00000405359 345 ntBASIC5.17□□□□□ -1.58
CTLA4P16410 MIR1275-201ENST00000408770 80 ntBASIC5.17□□□□□ -1.58
CTLA4P16410 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.17□□□□□ -1.58
CTLA4P16410 RN7SKP279-201ENST00000411383 298 ntBASIC5.17□□□□□ -1.58
CTLA4P16410 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.17□□□□□ -1.58
CTLA4P16410 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms