Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD28P10747 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CD28P10747 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC4.72□□□□□ -1.65
CD28P10747 SNX18P3-202ENST00000565670 1750 ntBASIC4.72□□□□□ -1.65
CD28P10747 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CD28P10747 GNL2P1-201ENST00000451274 2190 ntBASIC4.72□□□□□ -1.65
CD28P10747 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CD28P10747 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD28P10747 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CD28P10747 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
CD28P10747 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD28P10747 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD28P10747 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
CD28P10747 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD28P10747 AC011815.2-201ENST00000618230 2021 ntBASIC4.72□□□□□ -1.65
CD28P10747 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.72□□□□□ -1.65
CD28P10747 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CD28P10747 WDR95P-201ENST00000425638 1542 ntBASIC4.72□□□□□ -1.65
CD28P10747 ING3-204ENST00000431467 1447 ntTSL 2 BASIC4.72□□□□□ -1.65
CD28P10747 RBPJP7-201ENST00000442803 1447 ntBASIC4.72□□□□□ -1.65
CD28P10747 RBPJP5-201ENST00000449433 1447 ntBASIC4.72□□□□□ -1.65
CD28P10747 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD28P10747 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
CD28P10747 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CD28P10747 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC4.71□□□□□ -1.66
CD28P10747 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD28P10747 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CD28P10747 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
CD28P10747 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD28P10747 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC4.71□□□□□ -1.66
CD28P10747 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD28P10747 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC4.71□□□□□ -1.66
CD28P10747 AC026523.2-201ENST00000625039 7739 ntBASIC4.71□□□□□ -1.66
CD28P10747 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD28P10747 AL355377.1-201ENST00000621125 1653 ntBASIC4.71□□□□□ -1.66
CD28P10747 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CD28P10747 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD28P10747 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CD28P10747 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CD28P10747 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
CD28P10747 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CD28P10747 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC4.71□□□□□ -1.66
CD28P10747 RNA5SP242-201ENST00000364171 118 ntBASIC4.71□□□□□ -1.66
CD28P10747 AL451142.1-201ENST00000375867 775 ntBASIC4.71□□□□□ -1.66
CD28P10747 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CD28P10747 RPL7P58-201ENST00000402913 758 ntBASIC4.71□□□□□ -1.66
CD28P10747 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.71□□□□□ -1.66
CD28P10747 RNU4-64P-201ENST00000410795 131 ntBASIC4.71□□□□□ -1.66
CD28P10747 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC4.71□□□□□ -1.66
CD28P10747 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.71□□□□□ -1.66
CD28P10747 AC079355.1-201ENST00000421770 223 ntBASIC4.71□□□□□ -1.66
CD28P10747 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.71□□□□□ -1.66
CD28P10747 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC4.71□□□□□ -1.66
CD28P10747 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC4.71□□□□□ -1.66
CD28P10747 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.71□□□□□ -1.66
CD28P10747 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.71□□□□□ -1.66
CD28P10747 AL122020.1-201ENST00000472287 459 ntBASIC4.71□□□□□ -1.66
CD28P10747 RN7SKP248-201ENST00000516278 305 ntBASIC4.71□□□□□ -1.66
CD28P10747 SNORA81.2-201ENST00000516868 170 ntBASIC4.71□□□□□ -1.66
CD28P10747 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC4.71□□□□□ -1.66
CD28P10747 AP005639.1-201ENST00000526939 192 ntBASIC4.71□□□□□ -1.66
CD28P10747 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.71□□□□□ -1.66
CD28P10747 PCNAP4-201ENST00000532690 730 ntBASIC4.71□□□□□ -1.66
CD28P10747 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD28P10747 AC135626.1-201ENST00000556983 435 ntBASIC4.71□□□□□ -1.66
CD28P10747 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.71□□□□□ -1.66
CD28P10747 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.71□□□□□ -1.66
CD28P10747 AL049840.6-201ENST00000604583 345 ntBASIC4.71□□□□□ -1.66
CD28P10747 AL445649.1-201ENST00000615941 691 ntBASIC4.71□□□□□ -1.66
CD28P10747 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.71□□□□□ -1.66
CD28P10747 OR8G3P-202ENST00000641572 1255 ntBASIC4.71□□□□□ -1.66
CD28P10747 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC4.71□□□□□ -1.66
CD28P10747 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CD28P10747 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CD28P10747 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD28P10747 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
CD28P10747 NLN-202ENST00000502464 8354 ntTSL 5 BASIC4.71□□□□□ -1.66
CD28P10747 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC4.71□□□□□ -1.66
CD28P10747 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CD28P10747 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD28P10747 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
CD28P10747 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD28P10747 AC106872.5-201ENST00000508856 1416 ntBASIC4.71□□□□□ -1.66
CD28P10747 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CD28P10747 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CD28P10747 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD28P10747 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD28P10747 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC4.71□□□□□ -1.66
CD28P10747 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
CD28P10747 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC4.71□□□□□ -1.66
CD28P10747 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD28P10747 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC4.71□□□□□ -1.66
CD28P10747 USP9YP3-201ENST00000434481 1766 ntBASIC4.7□□□□□ -1.66
CD28P10747 FTO-215ENST00000636491 1676 ntTSL 5 BASIC4.7□□□□□ -1.66
CD28P10747 AC012254.3-201ENST00000591183 2117 ntBASIC4.7□□□□□ -1.66
CD28P10747 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD28P10747 AC011369.2-201ENST00000624423 1567 ntBASIC4.7□□□□□ -1.66
CD28P10747 AC027088.4-201ENST00000611559 1947 ntBASIC4.7□□□□□ -1.66
CD28P10747 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CD28P10747 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms