Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.11□□□□□ -1.43
CD48P09326 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.11□□□□□ -1.43
CD48P09326 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.11□□□□□ -1.43
CD48P09326 OR7A1P-201ENST00000601206 970 ntBASIC6.11□□□□□ -1.43
CD48P09326 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.11□□□□□ -1.43
CD48P09326 MIR6780B-201ENST00000610307 79 ntBASIC6.11□□□□□ -1.43
CD48P09326 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.11□□□□□ -1.43
CD48P09326 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CD48P09326 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.11□□□□□ -1.43
CD48P09326 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.11□□□□□ -1.43
CD48P09326 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.11□□□□□ -1.43
CD48P09326 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CD48P09326 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CD48P09326 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CD48P09326 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CD48P09326 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.11□□□□□ -1.43
CD48P09326 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CD48P09326 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.1□□□□□ -1.43
CD48P09326 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CD48P09326 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CD48P09326 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.1□□□□□ -1.43
CD48P09326 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC6.1□□□□□ -1.43
CD48P09326 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.1□□□□□ -1.43
CD48P09326 ATP5LP2-201ENST00000440646 311 ntBASIC6.1□□□□□ -1.43
CD48P09326 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CD48P09326 AC005077.1-201ENST00000449226 375 ntBASIC6.1□□□□□ -1.43
CD48P09326 FRG2FP-204ENST00000453982 852 ntBASIC6.1□□□□□ -1.43
CD48P09326 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.1□□□□□ -1.43
CD48P09326 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CD48P09326 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.1□□□□□ -1.43
CD48P09326 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.1□□□□□ -1.43
CD48P09326 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.1□□□□□ -1.43
CD48P09326 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.1□□□□□ -1.43
CD48P09326 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.1□□□□□ -1.43
CD48P09326 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC6.1□□□□□ -1.43
CD48P09326 AL845552.1-201ENST00000556820 323 ntBASIC6.1□□□□□ -1.43
CD48P09326 NPM1P5-201ENST00000557228 838 ntBASIC6.1□□□□□ -1.43
CD48P09326 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.1□□□□□ -1.43
CD48P09326 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CD48P09326 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.1□□□□□ -1.43
CD48P09326 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.1□□□□□ -1.43
CD48P09326 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.1□□□□□ -1.43
CD48P09326 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.1□□□□□ -1.43
CD48P09326 AC119674.1-217ENST00000641942 1086 ntBASIC6.1□□□□□ -1.43
CD48P09326 CASC19-274ENST00000642018 970 ntBASIC6.1□□□□□ -1.43
CD48P09326 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CD48P09326 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CD48P09326 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.1□□□□□ -1.43
CD48P09326 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CD48P09326 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CD48P09326 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.1□□□□□ -1.43
CD48P09326 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CD48P09326 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
CD48P09326 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CD48P09326 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CD48P09326 MFSD8-239ENST00000641590 2479 ntBASIC6.09□□□□□ -1.43
CD48P09326 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CD48P09326 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CD48P09326 AC093671.1-201ENST00000624981 2929 ntBASIC6.09□□□□□ -1.43
CD48P09326 AC093225.1-201ENST00000506867 1408 ntBASIC6.09□□□□□ -1.43
CD48P09326 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CD48P09326 Z95114.1-201ENST00000624264 14574 ntBASIC6.09□□□□□ -1.43
CD48P09326 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CD48P09326 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.09□□□□□ -1.43
CD48P09326 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CD48P09326 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CD48P09326 FBXL21-201ENST00000297158 1305 ntBASIC6.09□□□□□ -1.43
CD48P09326 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CD48P09326 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CD48P09326 RNU1-65P-201ENST00000363919 148 ntBASIC6.09□□□□□ -1.43
CD48P09326 RN7SKP78-201ENST00000364711 318 ntBASIC6.09□□□□□ -1.43
CD48P09326 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CD48P09326 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CD48P09326 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.09□□□□□ -1.43
CD48P09326 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.09□□□□□ -1.43
CD48P09326 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.09□□□□□ -1.43
CD48P09326 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.09□□□□□ -1.43
CD48P09326 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.09□□□□□ -1.43
CD48P09326 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.09□□□□□ -1.43
CD48P09326 AC007679.3-201ENST00000434035 414 ntBASIC6.09□□□□□ -1.43
CD48P09326 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CD48P09326 RSU1P1-201ENST00000453416 441 ntBASIC6.09□□□□□ -1.43
CD48P09326 GEMIN2P1-201ENST00000454246 752 ntBASIC6.09□□□□□ -1.43
CD48P09326 RPL12P39-201ENST00000455456 496 ntBASIC6.09□□□□□ -1.43
CD48P09326 CST12P-201ENST00000457644 362 ntBASIC6.09□□□□□ -1.43
CD48P09326 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.09□□□□□ -1.43
CD48P09326 EIF4E2P2-201ENST00000492033 736 ntBASIC6.09□□□□□ -1.43
CD48P09326 RBBP4P1-201ENST00000502424 1276 ntBASIC6.09□□□□□ -1.43
CD48P09326 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.09□□□□□ -1.43
CD48P09326 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.09□□□□□ -1.43
CD48P09326 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.09□□□□□ -1.43
CD48P09326 IGLV3-30-201ENST00000524362 298 ntBASIC6.09□□□□□ -1.43
CD48P09326 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.09□□□□□ -1.43
CD48P09326 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.09□□□□□ -1.43
CD48P09326 AC126615.2-201ENST00000553003 515 ntBASIC6.09□□□□□ -1.43
CD48P09326 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.09□□□□□ -1.43
CD48P09326 MTATP6P25-201ENST00000574491 261 ntBASIC6.09□□□□□ -1.43
CD48P09326 AC005244.1-201ENST00000582566 339 ntBASIC6.09□□□□□ -1.43
CD48P09326 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.09□□□□□ -1.43
CD48P09326 AC025857.2-201ENST00000602711 238 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms