Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ZNF19-201ENST00000288177 3220 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
PDGFAP04085 ICE2P1-201ENST00000512800 1849 ntBASIC7.23□□□□□ -1.25
PDGFAP04085 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
PDGFAP04085 RNU6-259P-201ENST00000383999 107 ntBASIC7.23□□□□□ -1.25
PDGFAP04085 RNVU1-15-201ENST00000384476 165 ntBASIC7.23□□□□□ -1.25
PDGFAP04085 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
PDGFAP04085 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 MAML3-201ENST00000398940 831 ntTSL 5 BASIC7.23□□□□□ -1.25
PDGFAP04085 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 TYMSP1-201ENST00000407851 869 ntBASIC7.23□□□□□ -1.25
PDGFAP04085 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC7.23□□□□□ -1.25
PDGFAP04085 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.23□□□□□ -1.25
PDGFAP04085 ATG4AP1-201ENST00000416893 538 ntBASIC7.23□□□□□ -1.25
PDGFAP04085 AP000997.1-201ENST00000424313 479 ntTSL 3 BASIC7.23□□□□□ -1.25
PDGFAP04085 AP001324.1-201ENST00000428553 399 ntBASIC7.23□□□□□ -1.25
PDGFAP04085 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC7.23□□□□□ -1.25
PDGFAP04085 NIP7P1-201ENST00000433227 512 ntBASIC7.23□□□□□ -1.25
PDGFAP04085 VN1R54P-201ENST00000435210 1049 ntBASIC7.23□□□□□ -1.25
PDGFAP04085 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC7.23□□□□□ -1.25
PDGFAP04085 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC7.23□□□□□ -1.25
PDGFAP04085 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC7.23□□□□□ -1.25
PDGFAP04085 ELOCP23-201ENST00000452014 332 ntBASIC7.23□□□□□ -1.25
PDGFAP04085 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC7.23□□□□□ -1.25
PDGFAP04085 RPS4XP12-201ENST00000461747 709 ntBASIC7.23□□□□□ -1.25
PDGFAP04085 TMED11P-201ENST00000479478 690 ntBASIC7.23□□□□□ -1.25
PDGFAP04085 RPS10P28-201ENST00000480396 498 ntBASIC7.23□□□□□ -1.25
PDGFAP04085 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 AC104687.1-201ENST00000485829 412 ntBASIC7.23□□□□□ -1.25
PDGFAP04085 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.23□□□□□ -1.25
PDGFAP04085 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 AC111193.1-201ENST00000504097 155 ntBASIC7.23□□□□□ -1.25
PDGFAP04085 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC7.23□□□□□ -1.25
PDGFAP04085 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC7.23□□□□□ -1.25
PDGFAP04085 AC109471.1-201ENST00000511631 612 ntBASIC7.23□□□□□ -1.25
PDGFAP04085 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC7.23□□□□□ -1.25
PDGFAP04085 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC7.23□□□□□ -1.25
PDGFAP04085 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC7.23□□□□□ -1.25
PDGFAP04085 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC7.23□□□□□ -1.25
PDGFAP04085 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC7.23□□□□□ -1.25
PDGFAP04085 AL049869.4-201ENST00000555669 178 ntBASIC7.23□□□□□ -1.25
PDGFAP04085 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC7.23□□□□□ -1.25
PDGFAP04085 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.23□□□□□ -1.25
PDGFAP04085 BGLT3-201ENST00000564523 994 ntBASIC7.23□□□□□ -1.25
PDGFAP04085 TPRKBP2-201ENST00000565969 475 ntBASIC7.23□□□□□ -1.25
PDGFAP04085 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC7.23□□□□□ -1.25
PDGFAP04085 AL078623.1-201ENST00000602702 907 ntBASIC7.23□□□□□ -1.25
PDGFAP04085 AC090970.3-201ENST00000612566 866 ntBASIC7.23□□□□□ -1.25
PDGFAP04085 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC7.23□□□□□ -1.25
PDGFAP04085 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC7.23□□□□□ -1.25
PDGFAP04085 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.23□□□□□ -1.25
PDGFAP04085 AC119674.1-212ENST00000641155 993 ntBASIC7.23□□□□□ -1.25
PDGFAP04085 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 AL589642.1-201ENST00000430787 2582 ntTSL 2 BASIC7.23□□□□□ -1.25
PDGFAP04085 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.23□□□□□ -1.25
PDGFAP04085 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
PDGFAP04085 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
PDGFAP04085 ATP5A1P1-201ENST00000454088 1321 ntBASIC7.23□□□□□ -1.25
PDGFAP04085 MFSD8-256ENST00000641949 1640 ntBASIC7.23□□□□□ -1.25
PDGFAP04085 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.23□□□□□ -1.25
PDGFAP04085 AC241584.2-201ENST00000637142 2090 ntBASIC7.23□□□□□ -1.25
PDGFAP04085 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.23□□□□□ -1.25
PDGFAP04085 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDGFAP04085 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.23□□□□□ -1.25
PDGFAP04085 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC7.22□□□□□ -1.25
PDGFAP04085 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PDGFAP04085 NF1P7-201ENST00000612076 1530 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC7.22□□□□□ -1.25
PDGFAP04085 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PDGFAP04085 ZC3H14-203ENST00000318308 1384 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PDGFAP04085 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC7.22□□□□□ -1.25
PDGFAP04085 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
PDGFAP04085 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PDGFAP04085 MXRA7-207ENST00000592148 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
PDGFAP04085 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
PDGFAP04085 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.22□□□□□ -1.25
PDGFAP04085 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
PDGFAP04085 OR51A10P-201ENST00000307165 937 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
PDGFAP04085 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
PDGFAP04085 RNA5SP389-201ENST00000362610 115 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 RNA5SP226-201ENST00000362653 115 ntBASIC7.22□□□□□ -1.25
PDGFAP04085 RNA5SP302-201ENST00000364896 100 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 359.9 ms