Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 OR10T1P-201ENST00000424327 947 ntBASIC4.45□□□□□ -1.7
HLA-DQA1P01909 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 AHCYP8-201ENST00000425108 209 ntBASIC4.45□□□□□ -1.7
HLA-DQA1P01909 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 AL359265.1-201ENST00000440296 795 ntBASIC4.45□□□□□ -1.7
HLA-DQA1P01909 CYCSP51-201ENST00000443545 318 ntBASIC4.45□□□□□ -1.7
HLA-DQA1P01909 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 RPL36AP55-201ENST00000454114 305 ntBASIC4.45□□□□□ -1.7
HLA-DQA1P01909 RN7SL836P-201ENST00000476140 296 ntBASIC4.45□□□□□ -1.7
HLA-DQA1P01909 RN7SL70P-201ENST00000478322 302 ntBASIC4.45□□□□□ -1.7
HLA-DQA1P01909 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 AC093878.1-201ENST00000515630 432 ntBASIC4.45□□□□□ -1.7
HLA-DQA1P01909 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 AC023080.1-201ENST00000551663 931 ntBASIC4.45□□□□□ -1.7
HLA-DQA1P01909 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 CCL2-202ENST00000580907 736 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 AC012175.1-201ENST00000603755 531 ntBASIC4.45□□□□□ -1.7
HLA-DQA1P01909 AL078624.2-201ENST00000605063 554 ntBASIC4.45□□□□□ -1.7
HLA-DQA1P01909 AL353684.1-201ENST00000622677 1120 ntBASIC4.45□□□□□ -1.7
HLA-DQA1P01909 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 AC021766.1-201ENST00000624404 741 ntBASIC4.45□□□□□ -1.7
HLA-DQA1P01909 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 AC103703.1-201ENST00000634783 663 ntBASIC4.45□□□□□ -1.7
HLA-DQA1P01909 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 AC104623.2-202ENST00000623477 4002 ntBASIC4.45□□□□□ -1.7
HLA-DQA1P01909 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 RPL31P11-201ENST00000426558 1558 ntBASIC4.44□□□□□ -1.7
HLA-DQA1P01909 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 MRPS6P2-201ENST00000381143 370 ntBASIC4.44□□□□□ -1.7
HLA-DQA1P01909 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AL133482.1-201ENST00000415988 498 ntBASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AC017078.1-201ENST00000416146 368 ntBASIC4.44□□□□□ -1.7
HLA-DQA1P01909 DPPA2P2-201ENST00000418220 897 ntBASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 PTPN2P1-201ENST00000423212 1072 ntBASIC4.44□□□□□ -1.7
HLA-DQA1P01909 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 ENPP7P11-201ENST00000505915 627 ntBASIC4.44□□□□□ -1.7
HLA-DQA1P01909 ASNSP4-201ENST00000511103 447 ntBASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AC137549.1-201ENST00000514243 533 ntBASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AP001284.1-201ENST00000528393 2118 ntBASIC4.44□□□□□ -1.7
HLA-DQA1P01909 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 ASB8-203ENST00000535988 679 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AC092865.1-201ENST00000544395 1023 ntBASIC4.44□□□□□ -1.7
HLA-DQA1P01909 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 CHEK2P2-201ENST00000554701 672 ntBASIC4.44□□□□□ -1.7
HLA-DQA1P01909 NMNAT1P5-201ENST00000559657 841 ntBASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AC016839.1-201ENST00000578162 867 ntBASIC4.44□□□□□ -1.7
HLA-DQA1P01909 RNU4ATAC-201ENST00000580972 127 ntBASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AL512356.3-201ENST00000623005 461 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms