Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 IGLCOR22-2-201ENST00000605398 313 ntBASIC8.88□□□□□ -0.99
RAPGEF3O95398 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC8.88□□□□□ -0.99
RAPGEF3O95398 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC8.88□□□□□ -0.99
RAPGEF3O95398 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RAPGEF3O95398 AL391262.2-201ENST00000622466 494 ntBASIC8.88□□□□□ -0.99
RAPGEF3O95398 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
RAPGEF3O95398 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC8.88□□□□□ -0.99
RAPGEF3O95398 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
RAPGEF3O95398 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC8.88□□□□□ -0.99
RAPGEF3O95398 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RAPGEF3O95398 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC8.87□□□□□ -0.99
RAPGEF3O95398 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC8.87□□□□□ -0.99
RAPGEF3O95398 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RAPGEF3O95398 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RAPGEF3O95398 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
RAPGEF3O95398 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RAPGEF3O95398 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC8.87□□□□□ -0.99
RAPGEF3O95398 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
RAPGEF3O95398 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
RAPGEF3O95398 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC8.87□□□□□ -0.99
RAPGEF3O95398 SRSF1P1-201ENST00000424058 520 ntBASIC8.87□□□□□ -0.99
RAPGEF3O95398 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC8.87□□□□□ -0.99
RAPGEF3O95398 AC244033.1-201ENST00000426826 870 ntBASIC8.87□□□□□ -0.99
RAPGEF3O95398 EIF2S2P3-201ENST00000428356 999 ntBASIC8.87□□□□□ -0.99
RAPGEF3O95398 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC8.87□□□□□ -0.99
RAPGEF3O95398 AC019185.1-201ENST00000442718 389 ntBASIC8.87□□□□□ -0.99
RAPGEF3O95398 AL157777.1-201ENST00000468100 304 ntBASIC8.87□□□□□ -0.99
RAPGEF3O95398 RPL32P33-201ENST00000487023 394 ntBASIC8.87□□□□□ -0.99
RAPGEF3O95398 CEACAMP10-202ENST00000495431 496 ntBASIC8.87□□□□□ -0.99
RAPGEF3O95398 AC090638.1-201ENST00000498296 909 ntBASIC8.87□□□□□ -0.99
RAPGEF3O95398 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC8.87□□□□□ -0.99
RAPGEF3O95398 RNU6ATAC24P-201ENST00000516811 135 ntBASIC8.87□□□□□ -0.99
RAPGEF3O95398 AP002981.1-201ENST00000517692 975 ntBASIC8.87□□□□□ -0.99
RAPGEF3O95398 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC8.87□□□□□ -0.99
RAPGEF3O95398 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC8.87□□□□□ -0.99
RAPGEF3O95398 RBM22P12-201ENST00000567098 1255 ntBASIC8.87□□□□□ -0.99
RAPGEF3O95398 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.99
RAPGEF3O95398 TXNP4-201ENST00000575018 310 ntBASIC8.87□□□□□ -0.99
RAPGEF3O95398 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC8.87□□□□□ -0.99
RAPGEF3O95398 AC145423.1-201ENST00000605712 336 ntBASIC8.87□□□□□ -0.99
RAPGEF3O95398 AL139099.4-201ENST00000614802 114 ntBASIC8.87□□□□□ -0.99
RAPGEF3O95398 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC8.87□□□□□ -0.99
RAPGEF3O95398 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
RAPGEF3O95398 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
RAPGEF3O95398 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC8.87□□□□□ -0.99
RAPGEF3O95398 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC8.86□□□□□ -0.99
RAPGEF3O95398 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RAPGEF3O95398 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC8.86□□□□□ -0.99
RAPGEF3O95398 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RAPGEF3O95398 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RAPGEF3O95398 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RAPGEF3O95398 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC8.86□□□□□ -0.99
RAPGEF3O95398 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RAPGEF3O95398 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RAPGEF3O95398 U3.2-201ENST00000362981 210 ntBASIC8.86□□□□□ -0.99
RAPGEF3O95398 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RAPGEF3O95398 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RAPGEF3O95398 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RAPGEF3O95398 RNU1-77P-201ENST00000390868 162 ntBASIC8.86□□□□□ -0.99
RAPGEF3O95398 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC8.86□□□□□ -0.99
RAPGEF3O95398 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC8.86□□□□□ -0.99
RAPGEF3O95398 CUBNP2-201ENST00000443534 1139 ntBASIC8.86□□□□□ -0.99
RAPGEF3O95398 CEACAMP7-201ENST00000444105 496 ntBASIC8.86□□□□□ -0.99
RAPGEF3O95398 AC099521.1-201ENST00000482557 334 ntBASIC8.86□□□□□ -0.99
RAPGEF3O95398 AC007686.1-201ENST00000488511 463 ntBASIC8.86□□□□□ -0.99
RAPGEF3O95398 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC8.86□□□□□ -0.99
RAPGEF3O95398 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC8.86□□□□□ -0.99
RAPGEF3O95398 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC8.86□□□□□ -0.99
RAPGEF3O95398 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC8.86□□□□□ -0.99
RAPGEF3O95398 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC8.86□□□□□ -0.99
RAPGEF3O95398 uc_338.18-201ENST00000615451 175 ntBASIC8.86□□□□□ -0.99
RAPGEF3O95398 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC8.86□□□□□ -0.99
RAPGEF3O95398 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RAPGEF3O95398 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC8.86□□□□□ -0.99
RAPGEF3O95398 TMEM75-201ENST00000624314 2165 ntBASIC8.86□□□□□ -0.99
RAPGEF3O95398 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RAPGEF3O95398 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RAPGEF3O95398 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RAPGEF3O95398 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RAPGEF3O95398 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC8.86□□□□□ -0.99
RAPGEF3O95398 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
RAPGEF3O95398 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RAPGEF3O95398 AL359091.1-201ENST00000449048 1734 ntBASIC8.85□□□□□ -0.99
RAPGEF3O95398 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
RAPGEF3O95398 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
RAPGEF3O95398 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
RAPGEF3O95398 UG0898H09-202ENST00000623646 7040 ntBASIC8.85□□□□□ -0.99
RAPGEF3O95398 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC8.85□□□□□ -0.99
RAPGEF3O95398 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
RAPGEF3O95398 AL159987.1-201ENST00000347911 293 ntBASIC8.85□□□□□ -0.99
RAPGEF3O95398 TPT1-204ENST00000379060 764 ntTSL 5 BASIC8.85□□□□□ -0.99
RAPGEF3O95398 RN7SKP166-201ENST00000410812 305 ntBASIC8.85□□□□□ -0.99
RAPGEF3O95398 FTH1P20-201ENST00000434913 548 ntBASIC8.85□□□□□ -0.99
RAPGEF3O95398 AL450023.1-201ENST00000450868 751 ntBASIC8.85□□□□□ -0.99
RAPGEF3O95398 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC8.85□□□□□ -0.99
RAPGEF3O95398 RNA5SP400-201ENST00000517155 111 ntBASIC8.85□□□□□ -0.99
RAPGEF3O95398 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC8.85□□□□□ -0.99
RAPGEF3O95398 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC8.85□□□□□ -0.99
RAPGEF3O95398 AC063977.5-201ENST00000601044 974 ntBASIC8.85□□□□□ -0.99
RAPGEF3O95398 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms