Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.15□□□□□ -1.42
SMAD6O43541 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
SMAD6O43541 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
SMAD6O43541 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
SMAD6O43541 AF287957.1-201ENST00000607368 1595 ntBASIC6.15□□□□□ -1.42
SMAD6O43541 AL353763.1-201ENST00000624467 1628 ntBASIC6.15□□□□□ -1.42
SMAD6O43541 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.15□□□□□ -1.42
SMAD6O43541 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.15□□□□□ -1.42
SMAD6O43541 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.15□□□□□ -1.42
SMAD6O43541 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SMAD6O43541 RN7SKP15-201ENST00000364742 309 ntBASIC6.15□□□□□ -1.42
SMAD6O43541 AP003170.5-201ENST00000397185 335 ntBASIC6.15□□□□□ -1.42
SMAD6O43541 RNA5SP251-201ENST00000410614 137 ntBASIC6.15□□□□□ -1.42
SMAD6O43541 RPL35AP3-201ENST00000414680 288 ntBASIC6.15□□□□□ -1.42
SMAD6O43541 AC244453.4-201ENST00000419150 388 ntBASIC6.15□□□□□ -1.42
SMAD6O43541 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC6.15□□□□□ -1.42
SMAD6O43541 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.15□□□□□ -1.42
SMAD6O43541 AC079807.1-201ENST00000429993 481 ntBASIC6.15□□□□□ -1.42
SMAD6O43541 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.15□□□□□ -1.42
SMAD6O43541 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SMAD6O43541 AC016027.4-201ENST00000450866 277 ntBASIC6.15□□□□□ -1.42
SMAD6O43541 CFL1P4-201ENST00000451536 498 ntBASIC6.15□□□□□ -1.42
SMAD6O43541 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.15□□□□□ -1.42
SMAD6O43541 RN7SL269P-201ENST00000467795 305 ntBASIC6.15□□□□□ -1.42
SMAD6O43541 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.15□□□□□ -1.42
SMAD6O43541 AC012123.2-201ENST00000485809 248 ntBASIC6.15□□□□□ -1.42
SMAD6O43541 RN7SL193P-201ENST00000491708 276 ntBASIC6.15□□□□□ -1.42
SMAD6O43541 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.15□□□□□ -1.42
SMAD6O43541 SUMO2P4-201ENST00000504193 276 ntBASIC6.15□□□□□ -1.42
SMAD6O43541 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.15□□□□□ -1.42
SMAD6O43541 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC6.15□□□□□ -1.42
SMAD6O43541 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SMAD6O43541 AC068305.2-201ENST00000550567 1205 ntBASIC6.15□□□□□ -1.42
SMAD6O43541 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.15□□□□□ -1.42
SMAD6O43541 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.15□□□□□ -1.42
SMAD6O43541 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.15□□□□□ -1.42
SMAD6O43541 AC015982.1-201ENST00000608113 465 ntBASIC6.15□□□□□ -1.42
SMAD6O43541 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6.15□□□□□ -1.42
SMAD6O43541 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SMAD6O43541 AC245014.3-201ENST00000618589 347 ntBASIC6.15□□□□□ -1.42
SMAD6O43541 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
SMAD6O43541 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.15□□□□□ -1.42
SMAD6O43541 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SMAD6O43541 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
SMAD6O43541 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SMAD6O43541 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
SMAD6O43541 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.15□□□□□ -1.43
SMAD6O43541 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SMAD6O43541 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.43
SMAD6O43541 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SMAD6O43541 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SMAD6O43541 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SMAD6O43541 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.15□□□□□ -1.43
SMAD6O43541 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.15□□□□□ -1.43
SMAD6O43541 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SMAD6O43541 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SMAD6O43541 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
SMAD6O43541 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SMAD6O43541 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SMAD6O43541 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SMAD6O43541 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SMAD6O43541 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SMAD6O43541 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SMAD6O43541 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.14□□□□□ -1.43
SMAD6O43541 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.14□□□□□ -1.43
SMAD6O43541 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SMAD6O43541 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SMAD6O43541 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SMAD6O43541 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.14□□□□□ -1.43
SMAD6O43541 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SMAD6O43541 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SMAD6O43541 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SMAD6O43541 OR7E25P-201ENST00000344844 931 ntBASIC6.14□□□□□ -1.43
SMAD6O43541 SUGT1P2-201ENST00000379452 992 ntBASIC6.14□□□□□ -1.43
SMAD6O43541 SNORA70H-201ENST00000383910 135 ntBASIC6.14□□□□□ -1.43
SMAD6O43541 SNORA70J-201ENST00000384182 135 ntBASIC6.14□□□□□ -1.43
SMAD6O43541 TMA16P2-201ENST00000413187 601 ntBASIC6.14□□□□□ -1.43
SMAD6O43541 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SMAD6O43541 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.14□□□□□ -1.43
SMAD6O43541 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.14□□□□□ -1.43
SMAD6O43541 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.14□□□□□ -1.43
SMAD6O43541 AL445466.1-201ENST00000448432 357 ntBASIC6.14□□□□□ -1.43
SMAD6O43541 AC089999.1-201ENST00000460336 374 ntBASIC6.14□□□□□ -1.43
SMAD6O43541 AC094085.1-201ENST00000468914 584 ntBASIC6.14□□□□□ -1.43
SMAD6O43541 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC6.14□□□□□ -1.43
SMAD6O43541 SETP21-201ENST00000514799 892 ntBASIC6.14□□□□□ -1.43
SMAD6O43541 Y_RNA.667-201ENST00000516212 107 ntBASIC6.14□□□□□ -1.43
SMAD6O43541 RNA5SP438-201ENST00000516561 112 ntBASIC6.14□□□□□ -1.43
SMAD6O43541 RNU6-467P-201ENST00000517027 110 ntBASIC6.14□□□□□ -1.43
SMAD6O43541 AP003396.4-201ENST00000527574 265 ntBASIC6.14□□□□□ -1.43
SMAD6O43541 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.14□□□□□ -1.43
SMAD6O43541 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC6.14□□□□□ -1.43
SMAD6O43541 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.14□□□□□ -1.43
SMAD6O43541 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.14□□□□□ -1.43
SMAD6O43541 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.14□□□□□ -1.43
SMAD6O43541 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.14□□□□□ -1.43
SMAD6O43541 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.14□□□□□ -1.43
SMAD6O43541 AC004836.1-201ENST00000623032 634 ntBASIC6.14□□□□□ -1.43
SMAD6O43541 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.14□□□□□ -1.43
SMAD6O43541 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms