Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
DDX39AO00148 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
DDX39AO00148 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
DDX39AO00148 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
DDX39AO00148 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
DDX39AO00148 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
DDX39AO00148 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
DDX39AO00148 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.69□□□□□ -1.34
DDX39AO00148 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.69□□□□□ -1.34
DDX39AO00148 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.69□□□□□ -1.34
DDX39AO00148 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.69□□□□□ -1.34
DDX39AO00148 AC093166.4-201ENST00000457867 318 ntBASIC6.69□□□□□ -1.34
DDX39AO00148 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
DDX39AO00148 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
DDX39AO00148 RNU6-1334P-201ENST00000516032 105 ntBASIC6.69□□□□□ -1.34
DDX39AO00148 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.69□□□□□ -1.34
DDX39AO00148 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.69□□□□□ -1.34
DDX39AO00148 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.69□□□□□ -1.34
DDX39AO00148 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.69□□□□□ -1.34
DDX39AO00148 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.69□□□□□ -1.34
DDX39AO00148 TXNP4-201ENST00000575018 310 ntBASIC6.69□□□□□ -1.34
DDX39AO00148 RPL12P48-201ENST00000605620 304 ntBASIC6.69□□□□□ -1.34
DDX39AO00148 AL136131.3-201ENST00000607600 188 ntBASIC6.69□□□□□ -1.34
DDX39AO00148 OR11H2-202ENST00000641517 1085 ntBASIC6.69□□□□□ -1.34
DDX39AO00148 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
DDX39AO00148 AC005725.1-201ENST00000577346 2607 ntBASIC6.69□□□□□ -1.34
DDX39AO00148 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
DDX39AO00148 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.69□□□□□ -1.34
DDX39AO00148 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
DDX39AO00148 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
DDX39AO00148 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
DDX39AO00148 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
DDX39AO00148 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.69□□□□□ -1.34
DDX39AO00148 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.69□□□□□ -1.34
DDX39AO00148 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.69□□□□□ -1.34
DDX39AO00148 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.69□□□□□ -1.34
DDX39AO00148 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
DDX39AO00148 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
DDX39AO00148 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
DDX39AO00148 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
DDX39AO00148 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.68□□□□□ -1.34
DDX39AO00148 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
DDX39AO00148 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
DDX39AO00148 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
DDX39AO00148 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
DDX39AO00148 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
DDX39AO00148 WDR95P-201ENST00000425638 1542 ntBASIC6.68□□□□□ -1.34
DDX39AO00148 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
DDX39AO00148 FUNDC2P3-201ENST00000334716 533 ntBASIC6.68□□□□□ -1.34
DDX39AO00148 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
DDX39AO00148 RNA5SP500-201ENST00000364486 119 ntBASIC6.68□□□□□ -1.34
DDX39AO00148 RN7SKP78-201ENST00000364711 318 ntBASIC6.68□□□□□ -1.34
DDX39AO00148 RN7SKP269-201ENST00000365545 319 ntBASIC6.68□□□□□ -1.34
DDX39AO00148 AC017078.1-201ENST00000416146 368 ntBASIC6.68□□□□□ -1.34
DDX39AO00148 RPL36P18-201ENST00000419316 318 ntBASIC6.68□□□□□ -1.34
DDX39AO00148 AL035660.1-201ENST00000422041 222 ntBASIC6.68□□□□□ -1.34
DDX39AO00148 AL731534.1-201ENST00000434711 269 ntBASIC6.68□□□□□ -1.34
DDX39AO00148 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.68□□□□□ -1.34
DDX39AO00148 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.68□□□□□ -1.34
DDX39AO00148 RPL7L1P3-201ENST00000455249 689 ntBASIC6.68□□□□□ -1.34
DDX39AO00148 SETP20-201ENST00000457046 852 ntBASIC6.68□□□□□ -1.34
DDX39AO00148 AL122020.1-201ENST00000472287 459 ntBASIC6.68□□□□□ -1.34
DDX39AO00148 AC104109.1-201ENST00000498563 436 ntBASIC6.68□□□□□ -1.34
DDX39AO00148 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
DDX39AO00148 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.68□□□□□ -1.34
DDX39AO00148 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.68□□□□□ -1.34
DDX39AO00148 AC090651.1-201ENST00000567865 634 ntBASIC6.68□□□□□ -1.34
DDX39AO00148 ZNF322P1-201ENST00000568013 1209 ntBASIC6.68□□□□□ -1.34
DDX39AO00148 GARSP1-201ENST00000570895 719 ntBASIC6.68□□□□□ -1.34
DDX39AO00148 AC090286.3-201ENST00000573133 187 ntBASIC6.68□□□□□ -1.34
DDX39AO00148 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
DDX39AO00148 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
DDX39AO00148 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
DDX39AO00148 OR8G3P-202ENST00000641572 1255 ntBASIC6.68□□□□□ -1.34
DDX39AO00148 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.68□□□□□ -1.34
DDX39AO00148 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
DDX39AO00148 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
DDX39AO00148 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
DDX39AO00148 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
DDX39AO00148 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
DDX39AO00148 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
DDX39AO00148 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
DDX39AO00148 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
DDX39AO00148 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
DDX39AO00148 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
DDX39AO00148 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
DDX39AO00148 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
DDX39AO00148 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
DDX39AO00148 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
DDX39AO00148 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
DDX39AO00148 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
DDX39AO00148 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.67□□□□□ -1.34
DDX39AO00148 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
DDX39AO00148 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
DDX39AO00148 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.67□□□□□ -1.34
DDX39AO00148 AL360271.1-201ENST00000395679 510 ntBASIC6.67□□□□□ -1.34
DDX39AO00148 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
DDX39AO00148 RN7SKP166-201ENST00000410812 305 ntBASIC6.67□□□□□ -1.34
DDX39AO00148 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.67□□□□□ -1.34
DDX39AO00148 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms