Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SUMO2P19-201ENST00000518920 295 ntBASIC5.6□□□□□ -1.51
NPIPA3F8WFD2 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.6□□□□□ -1.51
NPIPA3F8WFD2 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.6□□□□□ -1.51
NPIPA3F8WFD2 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NPIPA3F8WFD2 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.6□□□□□ -1.51
NPIPA3F8WFD2 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.6□□□□□ -1.51
NPIPA3F8WFD2 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.6□□□□□ -1.51
NPIPA3F8WFD2 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.6□□□□□ -1.51
NPIPA3F8WFD2 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.6□□□□□ -1.51
NPIPA3F8WFD2 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.6□□□□□ -1.51
NPIPA3F8WFD2 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.6□□□□□ -1.51
NPIPA3F8WFD2 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.6□□□□□ -1.51
NPIPA3F8WFD2 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.6□□□□□ -1.51
NPIPA3F8WFD2 AC092944.2-201ENST00000605443 889 ntBASIC5.6□□□□□ -1.51
NPIPA3F8WFD2 AL356752.1-201ENST00000615844 593 ntBASIC5.6□□□□□ -1.51
NPIPA3F8WFD2 AL445649.1-201ENST00000615941 691 ntBASIC5.6□□□□□ -1.51
NPIPA3F8WFD2 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NPIPA3F8WFD2 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
NPIPA3F8WFD2 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.6□□□□□ -1.51
NPIPA3F8WFD2 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 CASC19-238ENST00000641523 1558 ntBASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 AL117378.2-201ENST00000622916 1337 ntBASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 RNA5SP510-201ENST00000364697 99 ntBASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 AL445238.1-204ENST00000400311 463 ntBASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 MTND4LP21-201ENST00000415303 295 ntBASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 RPS7P8-201ENST00000418311 581 ntBASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 RPS17P17-201ENST00000419392 409 ntBASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 HMGB1P32-201ENST00000425971 565 ntBASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 OR52Y1P-201ENST00000452418 828 ntBASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 HLA-DPA3-207ENST00000454398 229 ntBASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 AC018638.3-201ENST00000461273 132 ntBASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 RN7SL165P-201ENST00000477476 291 ntBASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 OR52A4P-203ENST00000498233 1014 ntBASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 CR383658.1-201ENST00000514609 734 ntBASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 AP003396.4-201ENST00000527574 265 ntBASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 AC092865.1-201ENST00000544395 1023 ntBASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 NANOGNBP2-201ENST00000544753 553 ntBASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 AC026124.2-201ENST00000621847 656 ntBASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 FO681491.1-202ENST00000623392 737 ntBASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 MTCO1P1-201ENST00000624263 1081 ntBASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 AC022726.2-201ENST00000634673 547 ntBASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 AC062029.1-202ENST00000606164 3651 ntBASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.59□□□□□ -1.51
NPIPA3F8WFD2 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
NPIPA3F8WFD2 MAPK10-261ENST00000641050 3109 ntBASIC5.59□□□□□ -1.52
NPIPA3F8WFD2 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
NPIPA3F8WFD2 SHQ1P1-201ENST00000437111 1544 ntBASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 RN7SKP78-201ENST00000364711 318 ntBASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 SUGT1P2-201ENST00000379452 992 ntBASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 LYPLA1P3-201ENST00000402650 695 ntBASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 YY1P1-201ENST00000427625 668 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms