Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
NPIPA2E9PIF3 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 AL592429.1-201ENST00000403909 1473 ntBASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 AC023490.2-201ENST00000359859 470 ntBASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 SNORA21-201ENST00000362423 132 ntBASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 RNU1-49P-201ENST00000363468 159 ntBASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 U3.23-201ENST00000391132 200 ntBASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 AP003170.5-201ENST00000397185 335 ntBASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 AL132875.1-201ENST00000403623 949 ntBASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 RNA5SP156-201ENST00000410250 110 ntBASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 RN7SKP161-201ENST00000411110 305 ntBASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 RPS3P2-201ENST00000421346 701 ntBASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 RPS29P14-201ENST00000431518 171 ntBASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 AC009237.1-201ENST00000442127 744 ntBASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 AC002553.3-201ENST00000453002 341 ntBASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 AC025458.1-201ENST00000506046 166 ntBASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 AC090958.1-201ENST00000511122 351 ntBASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 RNA5SP340-201ENST00000517132 107 ntBASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 AL445649.1-201ENST00000615941 691 ntBASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.6□□□□□ -1.51
NPIPA2E9PIF3 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 Z95114.1-201ENST00000624264 14574 ntBASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 CASC19-238ENST00000641523 1558 ntBASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 AC022034.1-201ENST00000512867 2156 ntBASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 RNA5SP510-201ENST00000364697 99 ntBASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 AL445238.1-204ENST00000400311 463 ntBASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 RPS7P8-201ENST00000418311 581 ntBASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 RPS17P17-201ENST00000419392 409 ntBASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 HLA-DPA3-207ENST00000454398 229 ntBASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 AC018638.3-201ENST00000461273 132 ntBASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 RN7SL165P-201ENST00000477476 291 ntBASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 CR383658.1-201ENST00000514609 734 ntBASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 SETP21-201ENST00000514799 892 ntBASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 AP003396.4-201ENST00000527574 265 ntBASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 AC092865.1-201ENST00000544395 1023 ntBASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 NANOGNBP2-201ENST00000544753 553 ntBASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.59□□□□□ -1.51
NPIPA2E9PIF3 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms