Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC187A0A096LP49 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
CCDC187A0A096LP49 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC187A0A096LP49 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC187A0A096LP49 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC187A0A096LP49 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
CCDC187A0A096LP49 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
CCDC187A0A096LP49 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC187A0A096LP49 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.09□□□□□ -1.44
CCDC187A0A096LP49 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
CCDC187A0A096LP49 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CCDC187A0A096LP49 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
CCDC187A0A096LP49 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
CCDC187A0A096LP49 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.09□□□□□ -1.44
CCDC187A0A096LP49 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AL354854.1-201ENST00000455940 1363 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 MIR365B-201ENST00000362317 111 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 RNU6-609P-201ENST00000365459 107 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 RN7SKP81-201ENST00000365603 331 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 MIR421-201ENST00000365696 85 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 SUGT1P2-201ENST00000379452 992 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 SNORA17A-201ENST00000391185 133 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AL031985.1-201ENST00000392713 418 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 LYPLA1P3-201ENST00000402650 695 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AL512422.1-201ENST00000407033 553 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 CBX1P3-201ENST00000413296 527 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 MTCO1P45-201ENST00000431457 267 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AC022415.1-202ENST00000486612 523 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 RN7SL101P-201ENST00000496350 279 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AC095057.1-201ENST00000507583 168 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AC010374.2-201ENST00000512933 535 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 MTATP6P1-201ENST00000514057 681 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 RNU6-889P-201ENST00000517189 103 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AC113192.3-201ENST00000529152 742 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 RN7SL475P-201ENST00000583379 298 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AC015911.5-201ENST00000587076 451 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AC139493.1-201ENST00000604368 397 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AC135178.6-201ENST00000605314 398 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AL352984.2-201ENST00000611153 546 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 SNORA17.5-201ENST00000630429 132 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 MAPK10-350ENST00000641777 965 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 CASC19-238ENST00000641523 1558 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AL136984.1-201ENST00000607611 1893 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 HSPA8P19-201ENST00000505359 1517 ntBASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC187A0A096LP49 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CCDC187A0A096LP49 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC187A0A096LP49 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.07□□□□□ -1.44
CCDC187A0A096LP49 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CCDC187A0A096LP49 AL139384.2-201ENST00000613809 3590 ntBASIC6.07□□□□□ -1.44
CCDC187A0A096LP49 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
CCDC187A0A096LP49 AC127070.3-201ENST00000503695 3263 ntBASIC6.07□□□□□ -1.44
CCDC187A0A096LP49 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC187A0A096LP49 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC187A0A096LP49 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC187A0A096LP49 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CCDC187A0A096LP49 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC187A0A096LP49 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms