Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 MTND2P13-201ENST00000577438 1039 ntBASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 MIR5682-201ENST00000584864 76 ntBASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 AL008723.3-201ENST00000608926 449 ntBASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 IGKV2OR2-10-201ENST00000613976 311 ntBASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 AL445649.1-201ENST00000615941 691 ntBASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 AC069234.4-201ENST00000621276 412 ntBASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 AL162377.2-201ENST00000624532 337 ntBASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 AC103703.1-201ENST00000634783 663 ntBASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 AC027559.1-201ENST00000636288 271 ntBASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 OR7E91P-202ENST00000642062 1198 ntBASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RPH3ALQ9UNE2 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
RPH3ALQ9UNE2 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
RPH3ALQ9UNE2 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RPH3ALQ9UNE2 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RPH3ALQ9UNE2 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RPH3ALQ9UNE2 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
RPH3ALQ9UNE2 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 OR10AB1P-202ENST00000641219 1686 ntBASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 AL356317.1-201ENST00000396110 1436 ntBASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 PSMC1P6-201ENST00000477233 1319 ntBASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 RNA5-8SP5-201ENST00000365304 152 ntBASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 BMS1P3-201ENST00000372011 932 ntBASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 RNU11-6P-201ENST00000391127 133 ntBASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 RANP6-201ENST00000413691 644 ntBASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 MEG8-201ENST00000414488 800 ntTSL 3 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 HMGN2P27-201ENST00000427352 270 ntBASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 RPL7AP71-201ENST00000451120 739 ntBASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 RN7SL515P-201ENST00000463999 297 ntBASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 RPS16P9-201ENST00000477220 427 ntBASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 AC020779.1-201ENST00000478757 796 ntBASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 AC025271.1-201ENST00000485045 429 ntBASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 PSMA2P2-201ENST00000504319 686 ntBASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 AC131392.1-201ENST00000506490 633 ntBASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 AC147055.1-201ENST00000509261 750 ntBASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 AC011411.1-201ENST00000509592 876 ntBASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 RNA5SP318-201ENST00000516352 92 ntBASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 AC090651.1-201ENST00000567865 634 ntBASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 AP006587.6-201ENST00000582128 1091 ntBASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 FAM60CP-201ENST00000591086 664 ntBASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
RPH3ALQ9UNE2 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms