Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 SNORD16-201ENST00000362803 99 ntBASIC6.47□□□□□ -1.37
DKK3Q9UBP4 RN7SKP171-201ENST00000364417 303 ntBASIC6.47□□□□□ -1.37
DKK3Q9UBP4 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 AC003045.1-201ENST00000398779 713 ntBASIC6.47□□□□□ -1.37
DKK3Q9UBP4 RN7SKP86-201ENST00000410454 332 ntBASIC6.47□□□□□ -1.37
DKK3Q9UBP4 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 AC245884.2-201ENST00000426257 404 ntBASIC6.47□□□□□ -1.37
DKK3Q9UBP4 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 EMC3-AS1-205ENST00000438698 534 ntBASIC6.47□□□□□ -1.37
DKK3Q9UBP4 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 PMS2P9-201ENST00000441237 515 ntBASIC6.47□□□□□ -1.37
DKK3Q9UBP4 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 RN7SL643P-201ENST00000471845 291 ntBASIC6.47□□□□□ -1.37
DKK3Q9UBP4 GM2AP2-201ENST00000491764 562 ntBASIC6.47□□□□□ -1.37
DKK3Q9UBP4 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 IGKV2-19-201ENST00000518132 283 ntBASIC6.47□□□□□ -1.37
DKK3Q9UBP4 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 OR4A6P-201ENST00000534364 970 ntBASIC6.47□□□□□ -1.37
DKK3Q9UBP4 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 TPRX1P1-201ENST00000557620 319 ntBASIC6.47□□□□□ -1.37
DKK3Q9UBP4 AC090616.1-201ENST00000583895 447 ntBASIC6.47□□□□□ -1.37
DKK3Q9UBP4 AC087468.1-201ENST00000604365 630 ntBASIC6.47□□□□□ -1.37
DKK3Q9UBP4 AL499605.1-201ENST00000604628 403 ntBASIC6.47□□□□□ -1.37
DKK3Q9UBP4 AC073046.2-201ENST00000604756 527 ntBASIC6.47□□□□□ -1.37
DKK3Q9UBP4 AC120053.1-201ENST00000607706 736 ntBASIC6.47□□□□□ -1.37
DKK3Q9UBP4 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 MRPL57P1-201ENST00000621486 265 ntBASIC6.47□□□□□ -1.37
DKK3Q9UBP4 MIR6806-201ENST00000622141 64 ntBASIC6.47□□□□□ -1.37
DKK3Q9UBP4 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 UGT2B24P-201ENST00000514441 1597 ntBASIC6.47□□□□□ -1.37
DKK3Q9UBP4 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
DKK3Q9UBP4 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.46□□□□□ -1.37
DKK3Q9UBP4 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
DKK3Q9UBP4 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
DKK3Q9UBP4 AL136531.3-201ENST00000624378 3658 ntBASIC6.46□□□□□ -1.37
DKK3Q9UBP4 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
DKK3Q9UBP4 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
DKK3Q9UBP4 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 OR11H13P-201ENST00000359695 979 ntBASIC6.46□□□□□ -1.38
DKK3Q9UBP4 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 DHFRP2-201ENST00000414224 547 ntBASIC6.46□□□□□ -1.38
DKK3Q9UBP4 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 AL157884.1-201ENST00000424561 454 ntBASIC6.46□□□□□ -1.38
DKK3Q9UBP4 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 VN1R20P-201ENST00000425215 966 ntBASIC6.46□□□□□ -1.38
DKK3Q9UBP4 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 KCTD9P1-201ENST00000430462 1167 ntBASIC6.46□□□□□ -1.38
DKK3Q9UBP4 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 EEF1B2P3-201ENST00000447718 678 ntBASIC6.46□□□□□ -1.38
DKK3Q9UBP4 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 OR52I1-201ENST00000450052 1050 ntBASIC6.46□□□□□ -1.38
DKK3Q9UBP4 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 AC092824.1-201ENST00000483524 576 ntBASIC6.46□□□□□ -1.38
DKK3Q9UBP4 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 RN7SL362P-201ENST00000494228 267 ntBASIC6.46□□□□□ -1.38
DKK3Q9UBP4 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 AC114322.1-201ENST00000506771 926 ntBASIC6.46□□□□□ -1.38
DKK3Q9UBP4 C1GALT1P2-201ENST00000510813 1104 ntBASIC6.46□□□□□ -1.38
DKK3Q9UBP4 RN7SKP248-201ENST00000516278 305 ntBASIC6.46□□□□□ -1.38
DKK3Q9UBP4 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 IGHV4-55-201ENST00000520889 368 ntBASIC6.46□□□□□ -1.38
DKK3Q9UBP4 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 AC006116.7-201ENST00000590141 756 ntBASIC6.46□□□□□ -1.38
DKK3Q9UBP4 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 AC097467.4-201ENST00000605504 141 ntBASIC6.46□□□□□ -1.38
DKK3Q9UBP4 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 AC005828.7-201ENST00000607331 556 ntBASIC6.46□□□□□ -1.38
DKK3Q9UBP4 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 AL683826.1-201ENST00000624104 627 ntBASIC6.46□□□□□ -1.38
DKK3Q9UBP4 AC018659.2-201ENST00000624690 715 ntBASIC6.46□□□□□ -1.38
DKK3Q9UBP4 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.46□□□□□ -1.38
DKK3Q9UBP4 MIR1910-201ENST00000636955 80 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms