Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
LRIT1Q9P2V4 AC009464.1-201ENST00000615731 469 ntBASIC6.21□□□□□ -1.42
LRIT1Q9P2V4 AC097460.3-201ENST00000623099 442 ntBASIC6.21□□□□□ -1.42
LRIT1Q9P2V4 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
LRIT1Q9P2V4 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.21□□□□□ -1.42
LRIT1Q9P2V4 OR7E91P-202ENST00000642062 1198 ntBASIC6.21□□□□□ -1.42
LRIT1Q9P2V4 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LRIT1Q9P2V4 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 ZNF812P-201ENST00000457674 1694 ntBASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 AL589993.1-201ENST00000407450 2524 ntBASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 AC027279.1-201ENST00000568885 4284 ntBASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 AL356057.1-202ENST00000402263 756 ntBASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 IGLV3-4-201ENST00000432300 244 ntBASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 MTND2P8-201ENST00000450555 1025 ntBASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 OR6C72P-201ENST00000451403 892 ntBASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 AL139156.3-201ENST00000454802 394 ntBASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 RBBP4P1-201ENST00000502424 1276 ntBASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 KHDC1P1-201ENST00000511053 508 ntBASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 AC021146.10-201ENST00000515628 706 ntBASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 CKS1BP1-201ENST00000555221 240 ntBASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 AC015982.1-201ENST00000608113 465 ntBASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 AP001437.1-201ENST00000608783 456 ntBASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 AL355480.1-201ENST00000629041 99 ntBASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 OR52B5P-204ENST00000641744 3467 ntBASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 FBXL21-201ENST00000297158 1305 ntBASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 AC062022.1-201ENST00000451026 1684 ntBASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.2□□□□□ -1.42
LRIT1Q9P2V4 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.19□□□□□ -1.42
LRIT1Q9P2V4 AL157831.2-201ENST00000564681 3095 ntBASIC6.19□□□□□ -1.42
LRIT1Q9P2V4 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LRIT1Q9P2V4 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
LRIT1Q9P2V4 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LRIT1Q9P2V4 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
LRIT1Q9P2V4 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
LRIT1Q9P2V4 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LRIT1Q9P2V4 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LRIT1Q9P2V4 AC061975.7-201ENST00000592016 2692 ntBASIC6.19□□□□□ -1.42
LRIT1Q9P2V4 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LRIT1Q9P2V4 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LRIT1Q9P2V4 SNORA27.3-201ENST00000364937 134 ntBASIC6.19□□□□□ -1.42
LRIT1Q9P2V4 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
LRIT1Q9P2V4 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms