Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC88CQ9P219 RNF19BPY-201ENST00000458209 1550 ntBASIC5.68□□□□□ -1.5
CCDC88CQ9P219 ZNF402P-201ENST00000404435 3100 ntBASIC5.68□□□□□ -1.5
CCDC88CQ9P219 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC88CQ9P219 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC88CQ9P219 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC88CQ9P219 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC88CQ9P219 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC88CQ9P219 AL117339.4-201ENST00000608335 7063 ntBASIC5.68□□□□□ -1.5
CCDC88CQ9P219 FUNDC2P3-201ENST00000334716 533 ntBASIC5.68□□□□□ -1.5
CCDC88CQ9P219 RN7SKP78-201ENST00000364711 318 ntBASIC5.68□□□□□ -1.5
CCDC88CQ9P219 AL096829.1-201ENST00000413677 457 ntBASIC5.68□□□□□ -1.5
CCDC88CQ9P219 CDY17P-201ENST00000414121 1282 ntBASIC5.68□□□□□ -1.5
CCDC88CQ9P219 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC88CQ9P219 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.68□□□□□ -1.5
CCDC88CQ9P219 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.68□□□□□ -1.5
CCDC88CQ9P219 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC88CQ9P219 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CCDC88CQ9P219 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC88CQ9P219 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC88CQ9P219 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC88CQ9P219 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC88CQ9P219 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC88CQ9P219 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.68□□□□□ -1.5
CCDC88CQ9P219 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC88CQ9P219 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC88CQ9P219 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC88CQ9P219 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.68□□□□□ -1.5
CCDC88CQ9P219 AC008555.7-201ENST00000605008 583 ntBASIC5.68□□□□□ -1.5
CCDC88CQ9P219 AC145423.1-201ENST00000605712 336 ntBASIC5.68□□□□□ -1.5
CCDC88CQ9P219 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC88CQ9P219 AL357562.1-201ENST00000624911 609 ntBASIC5.68□□□□□ -1.5
CCDC88CQ9P219 OR8G3P-202ENST00000641572 1255 ntBASIC5.68□□□□□ -1.5
CCDC88CQ9P219 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CCDC88CQ9P219 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC88CQ9P219 HSPD1P9-201ENST00000420325 1636 ntBASIC5.68□□□□□ -1.5
CCDC88CQ9P219 AP000641.1-201ENST00000531988 1639 ntBASIC5.68□□□□□ -1.5
CCDC88CQ9P219 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 RNA5SP156-201ENST00000410250 110 ntBASIC5.67□□□□□ -1.5
CCDC88CQ9P219 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 RPL31P15-201ENST00000449770 338 ntBASIC5.67□□□□□ -1.5
CCDC88CQ9P219 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 RNA5SP400-201ENST00000517155 111 ntBASIC5.67□□□□□ -1.5
CCDC88CQ9P219 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 AC244502.2-201ENST00000543361 851 ntBASIC5.67□□□□□ -1.5
CCDC88CQ9P219 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 NEPNP-201ENST00000404786 1371 ntBASIC5.67□□□□□ -1.5
CCDC88CQ9P219 JPX-212ENST00000639185 9658 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 SNORD8-201ENST00000363915 110 ntBASIC5.67□□□□□ -1.5
CCDC88CQ9P219 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.67□□□□□ -1.5
CCDC88CQ9P219 RPS12P17-201ENST00000438591 377 ntBASIC5.67□□□□□ -1.5
CCDC88CQ9P219 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 NENFP3-201ENST00000503735 313 ntBASIC5.67□□□□□ -1.5
CCDC88CQ9P219 GAPDHP71-201ENST00000511530 1003 ntBASIC5.67□□□□□ -1.5
CCDC88CQ9P219 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC88CQ9P219 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 AC009135.2-201ENST00000624136 1768 ntBASIC5.66□□□□□ -1.5
CCDC88CQ9P219 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 DOCK11P1-201ENST00000553480 5932 ntBASIC5.66□□□□□ -1.5
CCDC88CQ9P219 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.66□□□□□ -1.5
CCDC88CQ9P219 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC88CQ9P219 MYL6P5-201ENST00000412707 459 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms