Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 LINC00498-201ENST00000504369 455 ntTSL 3 BASIC10□□□□□ -0.81
RTN4Q9NQC3 LINC02213-201ENST00000504650 518 ntTSL 3 BASIC10□□□□□ -0.81
RTN4Q9NQC3 AC110768.2-201ENST00000506540 329 ntBASIC10□□□□□ -0.81
RTN4Q9NQC3 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC10□□□□□ -0.81
RTN4Q9NQC3 Y_RNA.672-201ENST00000516289 104 ntBASIC10□□□□□ -0.81
RTN4Q9NQC3 STMN2-202ENST00000518111 799 ntTSL 3 BASIC10□□□□□ -0.81
RTN4Q9NQC3 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC10□□□□□ -0.81
RTN4Q9NQC3 AP000859.1-201ENST00000525536 307 ntBASIC10□□□□□ -0.81
RTN4Q9NQC3 OR5M6P-201ENST00000530227 937 ntBASIC10□□□□□ -0.81
RTN4Q9NQC3 TUBB4BP1-201ENST00000545422 178 ntBASIC10□□□□□ -0.81
RTN4Q9NQC3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC10□□□□□ -0.81
RTN4Q9NQC3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC10□□□□□ -0.81
RTN4Q9NQC3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC10□□□□□ -0.81
RTN4Q9NQC3 UBE2CP4-201ENST00000561405 535 ntBASIC10□□□□□ -0.81
RTN4Q9NQC3 AL157394.1-201ENST00000562983 1224 ntBASIC10□□□□□ -0.81
RTN4Q9NQC3 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC10□□□□□ -0.81
RTN4Q9NQC3 AC127521.1-201ENST00000576086 854 ntTSL 3 BASIC10□□□□□ -0.81
RTN4Q9NQC3 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC10□□□□□ -0.81
RTN4Q9NQC3 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC10□□□□□ -0.81
RTN4Q9NQC3 AC091132.5-201ENST00000590995 560 ntTSL 5 BASIC10□□□□□ -0.81
RTN4Q9NQC3 BNIP3P15-201ENST00000604600 301 ntBASIC10□□□□□ -0.81
RTN4Q9NQC3 AC055822.1-201ENST00000606067 445 ntBASIC10□□□□□ -0.81
RTN4Q9NQC3 ACACA-232ENST00000614438 569 ntTSL 2 BASIC10□□□□□ -0.81
RTN4Q9NQC3 WT1-AS_1.1-201ENST00000619639 109 ntBASIC10□□□□□ -0.81
RTN4Q9NQC3 AC104985.2-201ENST00000620598 500 ntBASIC10□□□□□ -0.81
RTN4Q9NQC3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC10□□□□□ -0.81
RTN4Q9NQC3 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC10□□□□□ -0.81
RTN4Q9NQC3 AP002800.1-201ENST00000624982 2225 ntBASIC10□□□□□ -0.81
RTN4Q9NQC3 MTCO1P7-201ENST00000419523 1542 ntBASIC10□□□□□ -0.81
RTN4Q9NQC3 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
RTN4Q9NQC3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC10□□□□□ -0.81
RTN4Q9NQC3 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
RTN4Q9NQC3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
RTN4Q9NQC3 AIG1-202ENST00000357847 1395 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
RTN4Q9NQC3 HEPACAM2-204ENST00000453812 1869 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
RTN4Q9NQC3 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC10□□□□□ -0.81
RTN4Q9NQC3 ZNF565-203ENST00000392173 1931 ntAPPRIS P2 TSL 2 BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 EEF1A1P2-201ENST00000553854 1447 ntBASIC9.99□□□□□ -0.81
RTN4Q9NQC3 MEF2C-221ENST00000514015 2772 ntTSL 5 BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 MFSD8-218ENST00000641186 4448 ntBASIC9.99□□□□□ -0.81
RTN4Q9NQC3 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 NSF-206ENST00000575068 2667 ntTSL 2 BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 SLN-201ENST00000305991 722 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 APOO-201ENST00000379226 1118 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 EIF5P1-201ENST00000400019 1231 ntBASIC9.99□□□□□ -0.81
RTN4Q9NQC3 MRPL42P2-201ENST00000403169 426 ntBASIC9.99□□□□□ -0.81
RTN4Q9NQC3 BX295541.1-201ENST00000417774 250 ntBASIC9.99□□□□□ -0.81
RTN4Q9NQC3 LINC02090-201ENST00000419151 400 ntTSL 3 BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 AL355001.1-201ENST00000422148 444 ntTSL 5 BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 NR1I3-209ENST00000428574 1117 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 AL451074.3-201ENST00000437709 472 ntBASIC9.99□□□□□ -0.81
RTN4Q9NQC3 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 C4orf51-201ENST00000438731 932 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 AC007237.1-201ENST00000442074 499 ntBASIC9.99□□□□□ -0.81
RTN4Q9NQC3 AL512326.1-201ENST00000443050 721 ntBASIC9.99□□□□□ -0.81
RTN4Q9NQC3 AC005840.2-201ENST00000447193 355 ntBASIC9.99□□□□□ -0.81
RTN4Q9NQC3 LINC01501-203ENST00000449990 791 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 BTF3P5-201ENST00000457252 467 ntBASIC9.99□□□□□ -0.81
RTN4Q9NQC3 THAP6-203ENST00000502620 582 ntTSL 3 BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 AC021001.1-201ENST00000518703 987 ntBASIC9.99□□□□□ -0.81
RTN4Q9NQC3 AC011632.1-201ENST00000523860 773 ntTSL 3 BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 DDIT3-205ENST00000552740 951 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 UBE2CP1-201ENST00000557130 554 ntBASIC9.99□□□□□ -0.81
RTN4Q9NQC3 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 UBBP4-201ENST00000583708 689 ntBASIC9.99□□□□□ -0.81
RTN4Q9NQC3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 SLC6A21P-201ENST00000599458 369 ntBASIC9.99□□□□□ -0.81
RTN4Q9NQC3 HSPE1P14-201ENST00000605812 302 ntBASIC9.99□□□□□ -0.81
RTN4Q9NQC3 AC090948.2-201ENST00000607363 564 ntBASIC9.99□□□□□ -0.81
RTN4Q9NQC3 AL137000.1-201ENST00000610528 1244 ntBASIC9.99□□□□□ -0.81
RTN4Q9NQC3 MLECP1-201ENST00000615893 709 ntBASIC9.99□□□□□ -0.81
RTN4Q9NQC3 AC123768.4-201ENST00000616244 701 ntBASIC9.99□□□□□ -0.81
RTN4Q9NQC3 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 AC126915.3-201ENST00000620111 208 ntBASIC9.99□□□□□ -0.81
RTN4Q9NQC3 AL445264.1-201ENST00000621719 171 ntBASIC9.99□□□□□ -0.81
RTN4Q9NQC3 AC027575.4-201ENST00000622010 586 ntBASIC9.99□□□□□ -0.81
RTN4Q9NQC3 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 ALB-209ENST00000503124 1741 ntTSL 5 BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
RTN4Q9NQC3 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 CCDC190-201ENST00000367910 1498 ntAPPRIS P2 TSL 2 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 AL135903.1-201ENST00000402742 1590 ntBASIC9.98□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms