Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC103703.1-201ENST00000634783 663 ntBASIC5.38□□□□□ -1.55
HMG20AQ9NP66 AL022322.2-201ENST00000624072 20397 ntBASIC5.38□□□□□ -1.55
HMG20AQ9NP66 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
HMG20AQ9NP66 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMG20AQ9NP66 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMG20AQ9NP66 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.38□□□□□ -1.55
HMG20AQ9NP66 AC006600.2-201ENST00000624834 2506 ntBASIC5.38□□□□□ -1.55
HMG20AQ9NP66 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMG20AQ9NP66 FANCD2P2-201ENST00000437591 1400 ntBASIC5.38□□□□□ -1.55
HMG20AQ9NP66 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMG20AQ9NP66 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 AL078595.2-201ENST00000605309 1780 ntBASIC5.37□□□□□ -1.55
HMG20AQ9NP66 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 NPM1P38-201ENST00000403835 865 ntBASIC5.37□□□□□ -1.55
HMG20AQ9NP66 RN7SKP221-201ENST00000410420 301 ntBASIC5.37□□□□□ -1.55
HMG20AQ9NP66 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 HMGN1P32-201ENST00000441744 256 ntBASIC5.37□□□□□ -1.55
HMG20AQ9NP66 RPS23P9-201ENST00000448848 438 ntBASIC5.37□□□□□ -1.55
HMG20AQ9NP66 RPL23AP60-201ENST00000450011 454 ntBASIC5.37□□□□□ -1.55
HMG20AQ9NP66 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 RANP2-201ENST00000456833 229 ntBASIC5.37□□□□□ -1.55
HMG20AQ9NP66 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 ASNSP4-201ENST00000511103 447 ntBASIC5.37□□□□□ -1.55
HMG20AQ9NP66 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.37□□□□□ -1.55
HMG20AQ9NP66 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 AL133399.1-201ENST00000527476 298 ntBASIC5.37□□□□□ -1.55
HMG20AQ9NP66 AC084851.2-201ENST00000530377 364 ntBASIC5.37□□□□□ -1.55
HMG20AQ9NP66 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 AC007346.2-201ENST00000564816 892 ntBASIC5.37□□□□□ -1.55
HMG20AQ9NP66 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 AC073046.2-201ENST00000604756 527 ntBASIC5.37□□□□□ -1.55
HMG20AQ9NP66 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 AC091059.2-201ENST00000623355 614 ntBASIC5.37□□□□□ -1.55
HMG20AQ9NP66 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMG20AQ9NP66 AC008079.2-201ENST00000623543 20396 ntBASIC5.37□□□□□ -1.55
HMG20AQ9NP66 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 AL645939.3-201ENST00000435408 225 ntBASIC5.36□□□□□ -1.55
HMG20AQ9NP66 GAPDHP37-201ENST00000442317 968 ntBASIC5.36□□□□□ -1.55
HMG20AQ9NP66 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 RPL31P11-202ENST00000454082 372 ntBASIC5.36□□□□□ -1.55
HMG20AQ9NP66 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 ABCC13-202ENST00000463099 3842 ntBASIC5.36□□□□□ -1.55
HMG20AQ9NP66 RN7SL790P-201ENST00000474043 298 ntBASIC5.36□□□□□ -1.55
HMG20AQ9NP66 RN7SL413P-201ENST00000482700 297 ntBASIC5.36□□□□□ -1.55
HMG20AQ9NP66 RPL23AP40-201ENST00000487630 390 ntBASIC5.36□□□□□ -1.55
HMG20AQ9NP66 AC018645.1-201ENST00000505003 109 ntBASIC5.36□□□□□ -1.55
HMG20AQ9NP66 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 RNU6-513P-201ENST00000516104 104 ntBASIC5.36□□□□□ -1.55
HMG20AQ9NP66 RN7SKP288-201ENST00000516227 268 ntBASIC5.36□□□□□ -1.55
HMG20AQ9NP66 BCAS2P1-201ENST00000528022 632 ntBASIC5.36□□□□□ -1.55
HMG20AQ9NP66 NPIPB14P-203ENST00000532298 987 ntBASIC5.36□□□□□ -1.55
HMG20AQ9NP66 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 OR9G2P-201ENST00000533326 880 ntBASIC5.36□□□□□ -1.55
HMG20AQ9NP66 AC068993.1-201ENST00000546724 589 ntBASIC5.36□□□□□ -1.55
HMG20AQ9NP66 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 LSM3P2-201ENST00000551246 273 ntBASIC5.36□□□□□ -1.55
HMG20AQ9NP66 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms