Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 AC007386.1-201ENST00000455212 582 ntBASIC6.21□□□□□ -1.42
PCDH9Q9HC56 OSTCP1-201ENST00000455507 450 ntBASIC6.21□□□□□ -1.42
PCDH9Q9HC56 AC021006.1-201ENST00000489849 553 ntBASIC6.21□□□□□ -1.42
PCDH9Q9HC56 AC090058.1-201ENST00000498788 435 ntBASIC6.21□□□□□ -1.42
PCDH9Q9HC56 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 AC091874.2-201ENST00000505889 720 ntBASIC6.21□□□□□ -1.42
PCDH9Q9HC56 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 AC021269.1-201ENST00000526860 705 ntBASIC6.21□□□□□ -1.42
PCDH9Q9HC56 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 MIR4701-201ENST00000583094 63 ntBASIC6.21□□□□□ -1.42
PCDH9Q9HC56 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 AL021368.1-201ENST00000607490 540 ntBASIC6.21□□□□□ -1.42
PCDH9Q9HC56 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 RFPL4AP6-201ENST00000616792 846 ntBASIC6.21□□□□□ -1.42
PCDH9Q9HC56 AC006213.5-201ENST00000619673 288 ntBASIC6.21□□□□□ -1.42
PCDH9Q9HC56 MIR6806-201ENST00000622141 64 ntBASIC6.21□□□□□ -1.42
PCDH9Q9HC56 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 AL596275.2-207ENST00000641188 675 ntBASIC6.21□□□□□ -1.42
PCDH9Q9HC56 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 AC027575.3-201ENST00000583058 2747 ntBASIC6.21□□□□□ -1.42
PCDH9Q9HC56 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 RN7SKP128-201ENST00000364270 303 ntBASIC6.2□□□□□ -1.42
PCDH9Q9HC56 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 MTND3P20-201ENST00000407663 186 ntBASIC6.2□□□□□ -1.42
PCDH9Q9HC56 MIR1275-201ENST00000408770 80 ntBASIC6.2□□□□□ -1.42
PCDH9Q9HC56 RPS7P8-201ENST00000418311 581 ntBASIC6.2□□□□□ -1.42
PCDH9Q9HC56 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 AC097523.2-201ENST00000435551 652 ntBASIC6.2□□□□□ -1.42
PCDH9Q9HC56 RPL5P7-201ENST00000444235 813 ntBASIC6.2□□□□□ -1.42
PCDH9Q9HC56 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 AC093166.3-201ENST00000448785 303 ntBASIC6.2□□□□□ -1.42
PCDH9Q9HC56 ACA64.4-201ENST00000459070 127 ntBASIC6.2□□□□□ -1.42
PCDH9Q9HC56 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 ST13P12-201ENST00000508958 1094 ntBASIC6.2□□□□□ -1.42
PCDH9Q9HC56 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 AC002519.2-203ENST00000567043 837 ntBASIC6.2□□□□□ -1.42
PCDH9Q9HC56 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 AC100814.1-201ENST00000606963 623 ntBASIC6.2□□□□□ -1.42
PCDH9Q9HC56 AC073389.3-201ENST00000609434 935 ntBASIC6.2□□□□□ -1.42
PCDH9Q9HC56 AL683826.1-201ENST00000624104 627 ntBASIC6.2□□□□□ -1.42
PCDH9Q9HC56 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 AL359955.1-201ENST00000455242 3275 ntBASIC6.2□□□□□ -1.42
PCDH9Q9HC56 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDH9Q9HC56 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.2□□□□□ -1.42
PCDH9Q9HC56 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.2□□□□□ -1.42
PCDH9Q9HC56 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 AC092070.2-203ENST00000598377 3644 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 AC022325.1-201ENST00000502748 2199 ntBASIC6.19□□□□□ -1.42
PCDH9Q9HC56 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDH9Q9HC56 SNORA21-201ENST00000362423 132 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms