Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 ICE2P1-201ENST00000512800 1849 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 TMEM161BP1-201ENST00000457388 1457 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 AC125238.2-201ENST00000430003 1440 ntBASIC6.33□□□□□ -1.4
TRIM54Q9BYV2 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 SAGE3P-201ENST00000619800 1635 ntBASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 SSXP3-201ENST00000442971 1300 ntBASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AC005225.5-201ENST00000623547 2225 ntBASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 MIR16-2-201ENST00000362117 81 ntBASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 RN7SKP237-201ENST00000364663 301 ntBASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AL451046.1-201ENST00000406097 534 ntBASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 MIR1266-201ENST00000408125 84 ntBASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 RNA5SP115-201ENST00000411160 107 ntBASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AL512661.1-201ENST00000434586 1253 ntBASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AL645939.3-201ENST00000435408 225 ntBASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AC002075.1-201ENST00000457396 676 ntBASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 RN7SL205P-201ENST00000490174 284 ntBASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 HAUS1P1-201ENST00000505275 832 ntBASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AC112518.2-201ENST00000508565 425 ntBASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 NPM1P21-201ENST00000513394 762 ntBASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AP003355.1-201ENST00000518956 587 ntBASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 SOX5P1-201ENST00000524155 1127 ntBASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AC131935.1-201ENST00000524621 333 ntBASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AC004923.2-201ENST00000529649 369 ntBASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 RPL3P13-201ENST00000550415 216 ntBASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 YWHAZP1-201ENST00000556286 722 ntBASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AC027334.1-201ENST00000603257 310 ntBASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 HSPD1P8-201ENST00000400121 1658 ntBASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM54Q9BYV2 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 AC067942.1-201ENST00000488045 1493 ntBASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 AC010132.2-201ENST00000295493 1043 ntBASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 RNA5SP478-201ENST00000364657 115 ntBASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 RNU6-1257P-201ENST00000384625 110 ntBASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 SNORA7A-201ENST00000384765 139 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms