Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 MAPK10-365ENST00000641902 3825 ntBASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 OR11H13P-201ENST00000359695 979 ntBASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 RNU6-1331P-201ENST00000363658 106 ntBASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 RNA5SP132-201ENST00000364725 118 ntBASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 ARAFP1-201ENST00000422172 605 ntBASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 AL606490.8-201ENST00000441624 319 ntBASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 AL512593.1-201ENST00000444758 779 ntBASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 BZW1P1-201ENST00000454901 1240 ntBASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 TSACC-207ENST00000470342 601 ntTSL 2 BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 CYCSP22-201ENST00000517555 339 ntBASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 AL589674.2-201ENST00000604304 337 ntBASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 AC092574.1-201ENST00000609771 420 ntBASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 OR7A1P-202ENST00000641542 1158 ntBASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 MIR193BHG-214ENST00000641765 509 ntBASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 AC105235.1-201ENST00000623208 1816 ntBASIC7.48□□□□□ -1.21
RTFDC1Q9BY42 NEPNP-201ENST00000404786 1371 ntBASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 RN7SKP160-201ENST00000363804 340 ntBASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 OR3A2-201ENST00000408891 1076 ntBASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 RPS21P8-201ENST00000413365 247 ntBASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 MGAT2P1-201ENST00000449718 797 ntBASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 ABCA11P-202ENST00000504019 2110 ntBASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 AC008429.4-201ENST00000521201 182 ntBASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 AC073916.1-201ENST00000545095 130 ntBASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 AC027229.1-201ENST00000583887 253 ntBASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 AC092821.2-201ENST00000545710 2042 ntBASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 AC119674.1-202ENST00000641333 1860 ntBASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
RTFDC1Q9BY42 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.46□□□□□ -1.21
RTFDC1Q9BY42 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
RTFDC1Q9BY42 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.46□□□□□ -1.21
RTFDC1Q9BY42 AC012254.3-201ENST00000591183 2117 ntBASIC7.46□□□□□ -1.21
RTFDC1Q9BY42 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
RTFDC1Q9BY42 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
RTFDC1Q9BY42 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 Y_RNA.110-201ENST00000363220 99 ntBASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 RNA5SP500-201ENST00000364486 119 ntBASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 AL353625.1-202ENST00000366273 571 ntBASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.46□□□□□ -1.22
RTFDC1Q9BY42 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms