Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 GPM6BP2-201ENST00000432046 144 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 HMGB3P9-201ENST00000441799 583 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 GPM6BP1-201ENST00000446387 144 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 CEACAMP5-201ENST00000448037 961 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 CYCSP44-201ENST00000448560 313 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 USP9YP23-201ENST00000455085 407 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 AC011979.1-201ENST00000472300 483 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 RPS23P1-201ENST00000491662 432 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 RN7SL284P-201ENST00000498823 275 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 AC006499.5-201ENST00000505037 514 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 AC018710.1-201ENST00000506509 158 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 OR5AQ1P-201ENST00000527596 927 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 NDFIP1P1-201ENST00000543144 525 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 VN1R107P-201ENST00000601784 209 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 uc_338.31-201ENST00000615595 186 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 MIR7844-201ENST00000616161 122 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 MIR6826-201ENST00000617808 98 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 AL161420.1-201ENST00000619393 264 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 MIR6719-201ENST00000622428 87 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 AC124864.2-201ENST00000624736 186 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 TAGAP-203ENST00000367066 3887 ntAPPRIS P4 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 LINC00858-201ENST00000415469 2685 ntTSL 2 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 IL1R1-208ENST00000424272 2658 ntTSL 5 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 PPM1L-202ENST00000464260 2735 ntTSL 2 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 DCAF1-201ENST00000335891 4114 ntTSL 5 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 AP001350.1-201ENST00000601906 1524 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 SLC9A6-207ENST00000636092 4697 ntTSL 5 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 GIN1-201ENST00000399004 3229 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 AC092162.3-201ENST00000624511 1624 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 AL132640.2-201ENST00000559968 1698 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 AC084876.2-201ENST00000624844 1709 ntBASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 ANK3-205ENST00000373827 7202 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 UBE3B-207ENST00000537063 3600 ntTSL 3 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 PFKFB1-202ENST00000375006 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 SLC9B2-203ENST00000503103 1911 ntTSL 2 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 TMEM231-201ENST00000258173 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 TCF4-226ENST00000565018 2357 ntTSL 5 BASIC7.66□□□□□ -1.18
COL25A1Q9BXS0 ZNF702P-201ENST00000270443 2990 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 MTBP-201ENST00000305949 3059 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 KALRN-211ENST00000460856 6509 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 RAB36-201ENST00000263116 3828 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 ZFP30-204ENST00000514101 4440 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 C2CD3-201ENST00000313663 6283 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 COPS4-201ENST00000264389 1744 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 EIF5A2-201ENST00000295822 5593 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 CEP57-201ENST00000325486 3098 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 SORCS1-202ENST00000344440 3009 ntTSL 5 BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 RNA5SP308-201ENST00000362532 115 ntBASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 Y_RNA.279-201ENST00000364763 95 ntBASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 Y_RNA.402-201ENST00000383972 102 ntBASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 KCNK2-201ENST00000391894 1491 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 NPM1P36-201ENST00000415681 835 ntBASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 MTND3P17-201ENST00000416968 344 ntBASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 DDX10P2-201ENST00000417796 2614 ntBASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 RPL17P17-201ENST00000419491 557 ntBASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 SLC30A8-201ENST00000427715 5430 ntTSL 2 BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 CEP192-202ENST00000430049 3286 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 MTCO3P21-201ENST00000430791 643 ntBASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 AC079781.1-201ENST00000441505 394 ntBASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms