Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RACGAP1P-201ENST00000550663 1879 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.27□□□□□ -1.41
VPS50Q96JG6 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VPS50Q96JG6 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VPS50Q96JG6 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
VPS50Q96JG6 AC025470.1-201ENST00000510053 2032 ntBASIC6.26□□□□□ -1.41
VPS50Q96JG6 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VPS50Q96JG6 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
VPS50Q96JG6 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.26□□□□□ -1.41
VPS50Q96JG6 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
VPS50Q96JG6 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.26□□□□□ -1.41
VPS50Q96JG6 FANCD2P2-201ENST00000437591 1400 ntBASIC6.26□□□□□ -1.41
VPS50Q96JG6 DDX6P1-205ENST00000441966 1436 ntBASIC6.26□□□□□ -1.41
VPS50Q96JG6 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
VPS50Q96JG6 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
VPS50Q96JG6 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.26□□□□□ -1.41
VPS50Q96JG6 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.26□□□□□ -1.41
VPS50Q96JG6 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VPS50Q96JG6 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VPS50Q96JG6 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VPS50Q96JG6 AC107977.1-201ENST00000355745 939 ntBASIC6.26□□□□□ -1.41
VPS50Q96JG6 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VPS50Q96JG6 SNORA11.5-201ENST00000408163 128 ntBASIC6.26□□□□□ -1.41
VPS50Q96JG6 RPS26P38-201ENST00000414476 348 ntBASIC6.26□□□□□ -1.41
VPS50Q96JG6 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.26□□□□□ -1.41
VPS50Q96JG6 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.26□□□□□ -1.41
VPS50Q96JG6 OR6R1P-201ENST00000431838 940 ntBASIC6.26□□□□□ -1.41
VPS50Q96JG6 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.26□□□□□ -1.41
VPS50Q96JG6 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.26□□□□□ -1.41
VPS50Q96JG6 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.26□□□□□ -1.41
VPS50Q96JG6 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.26□□□□□ -1.41
VPS50Q96JG6 RN7SL568P-201ENST00000493069 298 ntBASIC6.26□□□□□ -1.41
VPS50Q96JG6 SUMO2P4-201ENST00000504193 276 ntBASIC6.26□□□□□ -1.41
VPS50Q96JG6 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
VPS50Q96JG6 AC117525.1-201ENST00000515228 503 ntBASIC6.26□□□□□ -1.41
VPS50Q96JG6 AC005000.1-201ENST00000536192 288 ntBASIC6.26□□□□□ -1.41
VPS50Q96JG6 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
VPS50Q96JG6 RPL3P13-201ENST00000550415 216 ntBASIC6.26□□□□□ -1.41
VPS50Q96JG6 AC121758.1-202ENST00000556917 658 ntBASIC6.26□□□□□ -1.41
VPS50Q96JG6 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.26□□□□□ -1.41
VPS50Q96JG6 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.26□□□□□ -1.41
VPS50Q96JG6 AC011891.2-201ENST00000604949 397 ntBASIC6.26□□□□□ -1.41
VPS50Q96JG6 AL035410.2-201ENST00000604963 864 ntBASIC6.26□□□□□ -1.41
VPS50Q96JG6 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.26□□□□□ -1.41
VPS50Q96JG6 AC034229.4-201ENST00000607861 441 ntBASIC6.26□□□□□ -1.41
VPS50Q96JG6 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.26□□□□□ -1.41
VPS50Q96JG6 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.26□□□□□ -1.41
VPS50Q96JG6 AC004241.2-201ENST00000614562 444 ntBASIC6.26□□□□□ -1.41
VPS50Q96JG6 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.26□□□□□ -1.41
VPS50Q96JG6 AP000577.1-201ENST00000624366 878 ntBASIC6.26□□□□□ -1.41
VPS50Q96JG6 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.26□□□□□ -1.41
VPS50Q96JG6 AC009452.1-201ENST00000640823 606 ntBASIC6.26□□□□□ -1.41
VPS50Q96JG6 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
VPS50Q96JG6 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.26□□□□□ -1.41
VPS50Q96JG6 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.26□□□□□ -1.41
VPS50Q96JG6 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC6.26□□□□□ -1.41
VPS50Q96JG6 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VPS50Q96JG6 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
VPS50Q96JG6 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VPS50Q96JG6 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.26□□□□□ -1.41
VPS50Q96JG6 AC074141.1-201ENST00000588129 2995 ntBASIC6.26□□□□□ -1.41
VPS50Q96JG6 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.26□□□□□ -1.41
VPS50Q96JG6 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
VPS50Q96JG6 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VPS50Q96JG6 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VPS50Q96JG6 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
VPS50Q96JG6 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
VPS50Q96JG6 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VPS50Q96JG6 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
VPS50Q96JG6 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 MIR621-201ENST00000384919 96 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 MIR620-201ENST00000385232 95 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 PSMA6P1-201ENST00000400275 741 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 PRELID1P1-201ENST00000403549 660 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 RSL24D1P1-201ENST00000404972 493 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 AMZ2P2-201ENST00000406819 1057 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 RNA5SP115-201ENST00000411160 107 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 CBX1P3-201ENST00000413296 527 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 MTND4LP21-201ENST00000415303 295 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 THEM7P-201ENST00000419556 672 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 RPL24P2-201ENST00000421023 475 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 AKR1B10P1-201ENST00000425765 942 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 AC092601.1-201ENST00000444526 383 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 TIMM8BP2-201ENST00000445940 251 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VPS50Q96JG6 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 AC108751.3-201ENST00000461814 1020 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.25□□□□□ -1.41
VPS50Q96JG6 AC117394.1-201ENST00000477323 567 ntBASIC6.25□□□□□ -1.41
VPS50Q96JG6 AC092824.1-201ENST00000483524 576 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms