Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 MTHFD2P5-201ENST00000320415 844 ntBASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 LCN1P2-201ENST00000372030 223 ntBASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 AL356968.2-201ENST00000412769 1257 ntBASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 AC096644.3-201ENST00000416788 338 ntBASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 AL645936.1-201ENST00000441979 518 ntBASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 ZNF736P6Y-201ENST00000447526 1213 ntBASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 AC073476.1-201ENST00000452854 407 ntBASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 AP000547.1-201ENST00000454360 617 ntBASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 H3F3AP5-201ENST00000475267 429 ntBASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 RPL29P23-201ENST00000486188 442 ntBASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 CAB39P1-201ENST00000502277 460 ntBASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 AC092865.1-201ENST00000544395 1023 ntBASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 MT1CP-201ENST00000567054 174 ntBASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 MIR3189-201ENST00000578735 73 ntBASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 ARGFXP2-201ENST00000579304 949 ntBASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 AC027229.1-201ENST00000583887 253 ntBASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 DYNLL1P1-201ENST00000595442 269 ntBASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 BNIP3P35-201ENST00000604530 490 ntBASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 AOX3P-204ENST00000491025 2107 ntBASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 AC093909.5-201ENST00000621839 1799 ntBASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 RNA5SP346-201ENST00000363541 121 ntBASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 AL157702.1-201ENST00000398764 426 ntBASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 RN7SKP144-201ENST00000411108 279 ntBASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 MTND2P15-201ENST00000418575 892 ntBASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 RPL7AP14-201ENST00000424041 802 ntBASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 GAPDHP75-201ENST00000433910 943 ntBASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 ARMC4P1-201ENST00000438905 707 ntBASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 AC079922.1-201ENST00000443291 359 ntBASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 AL133351.3-201ENST00000454998 193 ntBASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 MARK2P8-201ENST00000476069 952 ntBASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 AC005017.1-201ENST00000482002 490 ntBASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 RPS27P20-201ENST00000492051 246 ntBASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 AC105420.1-201ENST00000504389 582 ntBASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 SNORA81.2-201ENST00000516868 170 ntBASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 RPA2P3-201ENST00000533268 770 ntBASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 AC134349.2-201ENST00000535136 910 ntBASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 AC005632.2-201ENST00000564271 828 ntBASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 MIR4433B-201ENST00000581329 102 ntBASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 BNIP3P19-201ENST00000605397 577 ntBASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 AL359742.1-201ENST00000622497 540 ntBASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 AC010325.3-201ENST00000641084 394 ntBASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 CCNT2P1-201ENST00000423082 1315 ntBASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CDK5RAP3Q96JB5 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 MAPK10-261ENST00000641050 3109 ntBASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 RNA5SP514-201ENST00000363717 111 ntBASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 SNORA27.3-201ENST00000364937 134 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms