Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC126365.2-201ENST00000580630 379 ntBASIC6.93□□□□□ -1.3
HPS3Q969F9 RNU4ATAC-201ENST00000580972 127 ntBASIC6.93□□□□□ -1.3
HPS3Q969F9 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.93□□□□□ -1.3
HPS3Q969F9 KATNBL1P5-201ENST00000605015 517 ntBASIC6.93□□□□□ -1.3
HPS3Q969F9 AC110792.4-201ENST00000609843 298 ntBASIC6.93□□□□□ -1.3
HPS3Q969F9 AL137246.2-201ENST00000613439 662 ntBASIC6.93□□□□□ -1.3
HPS3Q969F9 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.93□□□□□ -1.3
HPS3Q969F9 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC6.93□□□□□ -1.3
HPS3Q969F9 AC079298.2-201ENST00000623885 459 ntBASIC6.93□□□□□ -1.3
HPS3Q969F9 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.93□□□□□ -1.3
HPS3Q969F9 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HPS3Q969F9 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.93□□□□□ -1.3
HPS3Q969F9 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HPS3Q969F9 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.93□□□□□ -1.3
HPS3Q969F9 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.93□□□□□ -1.3
HPS3Q969F9 EIF3EP1-201ENST00000433978 1316 ntBASIC6.93□□□□□ -1.3
HPS3Q969F9 AC096921.2-201ENST00000561507 1916 ntBASIC6.93□□□□□ -1.3
HPS3Q969F9 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HPS3Q969F9 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
HPS3Q969F9 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HPS3Q969F9 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HPS3Q969F9 AC005725.1-201ENST00000577346 2607 ntBASIC6.93□□□□□ -1.3
HPS3Q969F9 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
HPS3Q969F9 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.92□□□□□ -1.3
HPS3Q969F9 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
HPS3Q969F9 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HPS3Q969F9 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HPS3Q969F9 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
HPS3Q969F9 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.92□□□□□ -1.3
HPS3Q969F9 AL022323.4-201ENST00000623980 13120 ntBASIC6.92□□□□□ -1.3
HPS3Q969F9 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
HPS3Q969F9 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
HPS3Q969F9 RNA5SP346-201ENST00000363541 121 ntBASIC6.92□□□□□ -1.3
HPS3Q969F9 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.92□□□□□ -1.3
HPS3Q969F9 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.92□□□□□ -1.3
HPS3Q969F9 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HPS3Q969F9 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HPS3Q969F9 RNU6-40P-201ENST00000384254 107 ntBASIC6.92□□□□□ -1.3
HPS3Q969F9 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.92□□□□□ -1.3
HPS3Q969F9 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.92□□□□□ -1.3
HPS3Q969F9 MTND4P24-201ENST00000424002 397 ntBASIC6.92□□□□□ -1.3
HPS3Q969F9 ELOCP6-201ENST00000429066 328 ntBASIC6.92□□□□□ -1.3
HPS3Q969F9 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.92□□□□□ -1.3
HPS3Q969F9 BMP6P1-201ENST00000431230 679 ntBASIC6.92□□□□□ -1.3
HPS3Q969F9 EMC3-AS1-205ENST00000438698 534 ntBASIC6.92□□□□□ -1.3
HPS3Q969F9 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.92□□□□□ -1.3
HPS3Q969F9 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.92□□□□□ -1.3
HPS3Q969F9 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HPS3Q969F9 AC007000.2-201ENST00000442564 487 ntBASIC6.92□□□□□ -1.3
HPS3Q969F9 ELOCP12-201ENST00000458706 328 ntBASIC6.92□□□□□ -1.3
HPS3Q969F9 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.92□□□□□ -1.3
HPS3Q969F9 AC106822.1-201ENST00000502647 526 ntBASIC6.92□□□□□ -1.3
HPS3Q969F9 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.92□□□□□ -1.3
HPS3Q969F9 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC6.92□□□□□ -1.3
HPS3Q969F9 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.92□□□□□ -1.3
HPS3Q969F9 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.92□□□□□ -1.3
HPS3Q969F9 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.92□□□□□ -1.3
HPS3Q969F9 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.92□□□□□ -1.3
HPS3Q969F9 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.92□□□□□ -1.3
HPS3Q969F9 AC011891.2-201ENST00000604949 397 ntBASIC6.92□□□□□ -1.3
HPS3Q969F9 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.92□□□□□ -1.3
HPS3Q969F9 AC090220.1-201ENST00000593078 1699 ntBASIC6.92□□□□□ -1.3
HPS3Q969F9 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HPS3Q969F9 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
HPS3Q969F9 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
HPS3Q969F9 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
HPS3Q969F9 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.92□□□□□ -1.3
HPS3Q969F9 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
HPS3Q969F9 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HPS3Q969F9 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
HPS3Q969F9 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HPS3Q969F9 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HPS3Q969F9 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HPS3Q969F9 TTC41P-205ENST00000551270 3963 ntBASIC6.92□□□□□ -1.3
HPS3Q969F9 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HPS3Q969F9 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HPS3Q969F9 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
HPS3Q969F9 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
HPS3Q969F9 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HPS3Q969F9 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HPS3Q969F9 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.91□□□□□ -1.3
HPS3Q969F9 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
HPS3Q969F9 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.91□□□□□ -1.3
HPS3Q969F9 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.91□□□□□ -1.3
HPS3Q969F9 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HPS3Q969F9 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.91□□□□□ -1.3
HPS3Q969F9 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.91□□□□□ -1.3
HPS3Q969F9 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HPS3Q969F9 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.91□□□□□ -1.3
HPS3Q969F9 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HPS3Q969F9 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HPS3Q969F9 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
HPS3Q969F9 AC007068.1-201ENST00000396690 844 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
HPS3Q969F9 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.91□□□□□ -1.3
HPS3Q969F9 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.91□□□□□ -1.3
HPS3Q969F9 AC007562.1-201ENST00000421819 517 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 ZNF965P-201ENST00000432501 817 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.91□□□□□ -1.3
HPS3Q969F9 SOCS5P1-201ENST00000440415 949 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms