Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC7.13□□□□□ -1.27
SNED1Q8TER0 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC7.13□□□□□ -1.27
SNED1Q8TER0 CT45A11P-201ENST00000448043 1134 ntBASIC7.13□□□□□ -1.27
SNED1Q8TER0 RPL38P3-201ENST00000484463 213 ntBASIC7.13□□□□□ -1.27
SNED1Q8TER0 RPL32P33-201ENST00000487023 394 ntBASIC7.13□□□□□ -1.27
SNED1Q8TER0 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC7.13□□□□□ -1.27
SNED1Q8TER0 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SNED1Q8TER0 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.13□□□□□ -1.27
SNED1Q8TER0 AC139365.2-201ENST00000517972 253 ntBASIC7.13□□□□□ -1.27
SNED1Q8TER0 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
SNED1Q8TER0 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC7.13□□□□□ -1.27
SNED1Q8TER0 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC7.13□□□□□ -1.27
SNED1Q8TER0 GARSP1-201ENST00000570895 719 ntBASIC7.13□□□□□ -1.27
SNED1Q8TER0 AC067852.5-201ENST00000589299 310 ntBASIC7.13□□□□□ -1.27
SNED1Q8TER0 AC063977.5-201ENST00000601044 974 ntBASIC7.13□□□□□ -1.27
SNED1Q8TER0 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC7.13□□□□□ -1.27
SNED1Q8TER0 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.13□□□□□ -1.27
SNED1Q8TER0 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SNED1Q8TER0 AC087516.1-201ENST00000561236 2428 ntBASIC7.13□□□□□ -1.27
SNED1Q8TER0 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
SNED1Q8TER0 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SNED1Q8TER0 AL353763.1-201ENST00000624467 1628 ntBASIC7.13□□□□□ -1.27
SNED1Q8TER0 GTF2IP4-201ENST00000453092 2054 ntBASIC7.13□□□□□ -1.27
SNED1Q8TER0 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.12□□□□□ -1.27
SNED1Q8TER0 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SNED1Q8TER0 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.12□□□□□ -1.27
SNED1Q8TER0 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.12□□□□□ -1.27
SNED1Q8TER0 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.12□□□□□ -1.27
SNED1Q8TER0 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC7.12□□□□□ -1.27
SNED1Q8TER0 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.12□□□□□ -1.27
SNED1Q8TER0 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC7.12□□□□□ -1.27
SNED1Q8TER0 UG0898H09-202ENST00000623646 7040 ntBASIC7.12□□□□□ -1.27
SNED1Q8TER0 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
SNED1Q8TER0 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SNED1Q8TER0 AC103591.2-201ENST00000265259 766 ntBASIC7.12□□□□□ -1.27
SNED1Q8TER0 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SNED1Q8TER0 RNA5SP507-201ENST00000363603 121 ntBASIC7.12□□□□□ -1.27
SNED1Q8TER0 U8.4-201ENST00000363626 134 ntBASIC7.12□□□□□ -1.27
SNED1Q8TER0 RNA5SP30-201ENST00000365552 115 ntBASIC7.12□□□□□ -1.27
SNED1Q8TER0 AC015977.1-201ENST00000418887 292 ntBASIC7.12□□□□□ -1.27
SNED1Q8TER0 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.12□□□□□ -1.27
SNED1Q8TER0 PSMD10P3-201ENST00000437000 448 ntBASIC7.12□□□□□ -1.27
SNED1Q8TER0 CYCSP12-201ENST00000437729 300 ntBASIC7.12□□□□□ -1.27
SNED1Q8TER0 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC7.12□□□□□ -1.27
SNED1Q8TER0 AC245047.2-201ENST00000441060 530 ntBASIC7.12□□□□□ -1.27
SNED1Q8TER0 RN7SL172P-201ENST00000460535 303 ntBASIC7.12□□□□□ -1.27
SNED1Q8TER0 RPS23P1-201ENST00000491662 432 ntBASIC7.12□□□□□ -1.27
SNED1Q8TER0 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SNED1Q8TER0 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC7.12□□□□□ -1.27
SNED1Q8TER0 NDUFB5P1-201ENST00000508134 564 ntBASIC7.12□□□□□ -1.27
SNED1Q8TER0 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC7.12□□□□□ -1.27
SNED1Q8TER0 AC015720.2-201ENST00000567709 334 ntBASIC7.12□□□□□ -1.27
SNED1Q8TER0 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.12□□□□□ -1.27
SNED1Q8TER0 PPATP2-201ENST00000605635 508 ntBASIC7.12□□□□□ -1.27
SNED1Q8TER0 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SNED1Q8TER0 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SNED1Q8TER0 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
SNED1Q8TER0 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.12□□□□□ -1.27
SNED1Q8TER0 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SNED1Q8TER0 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
SNED1Q8TER0 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
SNED1Q8TER0 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.12□□□□□ -1.27
SNED1Q8TER0 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
SNED1Q8TER0 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
SNED1Q8TER0 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SNED1Q8TER0 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SNED1Q8TER0 ALB-209ENST00000503124 1741 ntTSL 5 BASIC7.12□□□□□ -1.27
SNED1Q8TER0 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
SNED1Q8TER0 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
SNED1Q8TER0 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SNED1Q8TER0 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SNED1Q8TER0 AL359195.2-201ENST00000623657 4412 ntBASIC7.12□□□□□ -1.27
SNED1Q8TER0 AC005042.1-201ENST00000393397 800 ntBASIC7.11□□□□□ -1.27
SNED1Q8TER0 AC009804.1-201ENST00000400949 179 ntBASIC7.11□□□□□ -1.27
SNED1Q8TER0 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.11□□□□□ -1.27
SNED1Q8TER0 METTL15P3-201ENST00000415522 1221 ntBASIC7.11□□□□□ -1.27
SNED1Q8TER0 RPS27P18-201ENST00000431701 247 ntBASIC7.11□□□□□ -1.27
SNED1Q8TER0 AC019185.1-201ENST00000442718 389 ntBASIC7.11□□□□□ -1.27
SNED1Q8TER0 AL606490.1-201ENST00000452266 765 ntBASIC7.11□□□□□ -1.27
SNED1Q8TER0 RN7SL30P-201ENST00000488416 306 ntBASIC7.11□□□□□ -1.27
SNED1Q8TER0 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC7.11□□□□□ -1.27
SNED1Q8TER0 SCARNA6.1-201ENST00000516989 238 ntBASIC7.11□□□□□ -1.27
SNED1Q8TER0 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC7.11□□□□□ -1.27
SNED1Q8TER0 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SNED1Q8TER0 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.11□□□□□ -1.27
SNED1Q8TER0 OR4A42P-201ENST00000531397 938 ntBASIC7.11□□□□□ -1.27
SNED1Q8TER0 AC007494.1-201ENST00000562293 760 ntBASIC7.11□□□□□ -1.27
SNED1Q8TER0 AC137695.1-201ENST00000604126 489 ntBASIC7.11□□□□□ -1.27
SNED1Q8TER0 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SNED1Q8TER0 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SNED1Q8TER0 CD86-204ENST00000469710 1604 ntTSL 2 BASIC7.11□□□□□ -1.27
SNED1Q8TER0 AC008957.3-201ENST00000624112 2242 ntBASIC7.11□□□□□ -1.27
SNED1Q8TER0 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
SNED1Q8TER0 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
SNED1Q8TER0 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SNED1Q8TER0 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
SNED1Q8TER0 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.11□□□□□ -1.27
SNED1Q8TER0 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SNED1Q8TER0 AC023421.1-201ENST00000590535 1785 ntBASIC7.11□□□□□ -1.27
SNED1Q8TER0 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms