Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRAF3IP1Q8TDR0 AC027575.3-201ENST00000583058 2747 ntBASIC6.26□□□□□ -1.41
TRAF3IP1Q8TDR0 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
TRAF3IP1Q8TDR0 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 SNORA21-201ENST00000362423 132 ntBASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 RNU1-134P-201ENST00000362935 165 ntBASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 MYL6P5-201ENST00000412707 459 ntBASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 AC092865.3-201ENST00000425390 1026 ntBASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 AC044810.1-201ENST00000480271 711 ntBASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 RN7SL612P-201ENST00000497704 295 ntBASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 GUSBP9-201ENST00000510138 584 ntBASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 RNA5SP441-201ENST00000516809 88 ntBASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 RN7SKP5-201ENST00000517045 272 ntBASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 IGKV2-19-201ENST00000518132 283 ntBASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 BTG1P1-201ENST00000540396 508 ntBASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 AP000619.2-201ENST00000546014 969 ntBASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 HNRNPCP1-201ENST00000556181 766 ntBASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 AC234775.3-201ENST00000564612 656 ntBASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 AL078601.3-201ENST00000573303 535 ntBASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 LSM1P2-201ENST00000604911 322 ntBASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 MTCO1P28-201ENST00000574177 1528 ntBASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRAF3IP1Q8TDR0 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 NMD3P2-201ENST00000421815 761 ntBASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 AL139158.1-201ENST00000424719 340 ntBASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 AC021876.1-201ENST00000425959 359 ntBASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 RPS3AP38-201ENST00000435889 763 ntBASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 AC010240.2-201ENST00000445363 1205 ntBASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 REG1CP-206ENST00000447469 496 ntBASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 SEPT14P1-201ENST00000458703 648 ntBASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 CR383656.1-201ENST00000484916 377 ntBASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 HMGN1P17-201ENST00000513734 295 ntBASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 CR383658.1-201ENST00000514609 734 ntBASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 RN7SKP288-201ENST00000516227 268 ntBASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 AC036111.2-201ENST00000533247 901 ntBASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 MRPS21P8-201ENST00000569196 235 ntBASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 AC119403.2-201ENST00000590960 598 ntBASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.24□□□□□ -1.41
TRAF3IP1Q8TDR0 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms