Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 DCN-210ENST00000547568 823 ntTSL 3 BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 AC063977.5-201ENST00000601044 974 ntBASIC9.05□□□□□ -0.96
VPS8Q8N3P4 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 MIR6768-201ENST00000610734 72 ntBASIC9.05□□□□□ -0.96
VPS8Q8N3P4 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 MAPK10-350ENST00000641777 965 ntBASIC9.05□□□□□ -0.96
VPS8Q8N3P4 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 RN7SKP81-201ENST00000365603 331 ntBASIC9.05□□□□□ -0.96
VPS8Q8N3P4 SDHDP6-201ENST00000414693 480 ntBASIC9.05□□□□□ -0.96
VPS8Q8N3P4 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 AC092651.1-201ENST00000426110 312 ntBASIC9.05□□□□□ -0.96
VPS8Q8N3P4 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 RN7SL717P-201ENST00000478343 297 ntBASIC9.05□□□□□ -0.96
VPS8Q8N3P4 AC074255.1-201ENST00000511259 501 ntBASIC9.05□□□□□ -0.96
VPS8Q8N3P4 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 AC139697.1-201ENST00000548429 745 ntBASIC9.05□□□□□ -0.96
VPS8Q8N3P4 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 DPPA3P2-202ENST00000557188 1219 ntBASIC9.05□□□□□ -0.96
VPS8Q8N3P4 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 AC104695.2-201ENST00000605056 775 ntBASIC9.05□□□□□ -0.96
VPS8Q8N3P4 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 RN7SL787P-201ENST00000613000 284 ntBASIC9.05□□□□□ -0.96
VPS8Q8N3P4 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
VPS8Q8N3P4 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS8Q8N3P4 SRRM1P3-201ENST00000426911 2678 ntBASIC9.04□□□□□ -0.96
VPS8Q8N3P4 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
VPS8Q8N3P4 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC9.04□□□□□ -0.96
VPS8Q8N3P4 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
VPS8Q8N3P4 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC9.04□□□□□ -0.96
VPS8Q8N3P4 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS8Q8N3P4 AC009779.8-201ENST00000641684 4384 ntBASIC9.04□□□□□ -0.96
VPS8Q8N3P4 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
VPS8Q8N3P4 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
VPS8Q8N3P4 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC9.04□□□□□ -0.96
VPS8Q8N3P4 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC9.04□□□□□ -0.96
VPS8Q8N3P4 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC9.04□□□□□ -0.96
VPS8Q8N3P4 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC9.04□□□□□ -0.96
VPS8Q8N3P4 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC9.04□□□□□ -0.96
VPS8Q8N3P4 KRT8P51-201ENST00000438938 274 ntBASIC9.04□□□□□ -0.96
VPS8Q8N3P4 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC9.04□□□□□ -0.96
VPS8Q8N3P4 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC9.04□□□□□ -0.96
VPS8Q8N3P4 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC9.04□□□□□ -0.96
VPS8Q8N3P4 PPATP2-201ENST00000605635 508 ntBASIC9.04□□□□□ -0.96
VPS8Q8N3P4 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC9.04□□□□□ -0.96
VPS8Q8N3P4 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS8Q8N3P4 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS8Q8N3P4 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS8Q8N3P4 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC9.03□□□□□ -0.96
VPS8Q8N3P4 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS8Q8N3P4 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
VPS8Q8N3P4 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS8Q8N3P4 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS8Q8N3P4 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VPS8Q8N3P4 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS8Q8N3P4 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC9.03□□□□□ -0.96
VPS8Q8N3P4 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC9.03□□□□□ -0.96
VPS8Q8N3P4 AC006335.2-201ENST00000437993 330 ntBASIC9.03□□□□□ -0.96
VPS8Q8N3P4 RPL36AP39-201ENST00000445859 318 ntBASIC9.03□□□□□ -0.96
VPS8Q8N3P4 RSU1P1-201ENST00000453416 441 ntBASIC9.03□□□□□ -0.96
VPS8Q8N3P4 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC9.03□□□□□ -0.96
VPS8Q8N3P4 snoU109.5-201ENST00000516231 132 ntBASIC9.03□□□□□ -0.96
VPS8Q8N3P4 AC078899.1-201ENST00000521432 1185 ntBASIC9.03□□□□□ -0.96
VPS8Q8N3P4 IGHVIII-76-1-201ENST00000523776 286 ntBASIC9.03□□□□□ -0.96
VPS8Q8N3P4 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC9.03□□□□□ -0.96
VPS8Q8N3P4 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC9.03□□□□□ -0.96
VPS8Q8N3P4 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC9.03□□□□□ -0.96
VPS8Q8N3P4 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC9.03□□□□□ -0.96
VPS8Q8N3P4 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC9.03□□□□□ -0.96
VPS8Q8N3P4 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
VPS8Q8N3P4 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
VPS8Q8N3P4 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VPS8Q8N3P4 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
VPS8Q8N3P4 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC9.02□□□□□ -0.96
VPS8Q8N3P4 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
VPS8Q8N3P4 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
VPS8Q8N3P4 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC9.02□□□□□ -0.97
VPS8Q8N3P4 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VPS8Q8N3P4 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS8Q8N3P4 AC012213.2-201ENST00000562917 4597 ntBASIC9.02□□□□□ -0.97
VPS8Q8N3P4 RN7SKP293-201ENST00000411389 296 ntBASIC9.02□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms