Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC65Q8IXS2 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC65Q8IXS2 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 AP001284.1-201ENST00000528393 2118 ntBASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 IMMTP1-201ENST00000435590 2219 ntBASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 MIR1275-201ENST00000408770 80 ntBASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 RPL6P30-201ENST00000443382 862 ntBASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 AC009963.3-201ENST00000458090 486 ntBASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 AC005165.2-201ENST00000466070 380 ntBASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 TRBV5-2-201ENST00000489095 273 ntBASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 HSD3BP3-201ENST00000514706 994 ntBASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 RN7SKP35-201ENST00000517210 151 ntBASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 AC004801.6-201ENST00000616571 978 ntBASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 MIR6806-201ENST00000622141 64 ntBASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 MAPK10-350ENST00000641777 965 ntBASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 RBPJP7-201ENST00000442803 1447 ntBASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 RBPJP5-201ENST00000449433 1447 ntBASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 AC008627.1-201ENST00000517511 1704 ntBASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
CCDC65Q8IXS2 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 RNA5SP211-201ENST00000365516 117 ntBASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 SNORA51.9-201ENST00000384295 124 ntBASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 AC099677.3-201ENST00000427081 395 ntBASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 RPS3AP38-201ENST00000435889 763 ntBASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 RBMY2AP-201ENST00000445405 1157 ntBASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 AL445466.1-201ENST00000448432 357 ntBASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 RBMY2CP-201ENST00000448575 1157 ntBASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 RBMY2DP-202ENST00000448881 1157 ntBASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 RBMY2BP-202ENST00000451071 1156 ntBASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 AC120036.2-201ENST00000509729 1474 ntBASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 OR4A42P-201ENST00000531397 938 ntBASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 AC012254.3-201ENST00000591183 2117 ntBASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 AL132656.3-201ENST00000606384 1595 ntBASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 AL353684.1-201ENST00000622677 1120 ntBASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 AP001052.1-201ENST00000626421 99 ntBASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC65Q8IXS2 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 AL354854.1-201ENST00000455940 1363 ntBASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 REREP1Y-201ENST00000422655 198 ntBASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 PNKDP1-201ENST00000435914 430 ntBASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 REREP2Y-201ENST00000439103 200 ntBASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 AC118758.1-202ENST00000454719 225 ntBASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 AC023245.1-201ENST00000468501 517 ntBASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 AC098847.1-201ENST00000473094 348 ntBASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 AC008629.2-201ENST00000503783 483 ntBASIC6.62□□□□□ -1.35
CCDC65Q8IXS2 AC122718.2-201ENST00000505325 591 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms