Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL445687.2-201ENST00000458156 728 ntBASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 AL355032.1-201ENST00000472981 438 ntBASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 WBP1LP3-201ENST00000523033 208 ntBASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 AL162377.2-201ENST00000624532 337 ntBASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 THAP12P9-201ENST00000503971 2360 ntBASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 AC027088.4-201ENST00000611559 1947 ntBASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 RPS10P18-201ENST00000442662 495 ntBASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 CUBNP2-201ENST00000443534 1139 ntBASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 AC006499.4-201ENST00000510947 694 ntBASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 AC114781.3-201ENST00000512083 142 ntBASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 AC244502.2-201ENST00000543361 851 ntBASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 NDUFA5P11-201ENST00000567995 343 ntBASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 AL365181.4-201ENST00000609800 547 ntBASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 AC022400.9-201ENST00000623633 273 ntBASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 AC009950.2-201ENST00000636548 183 ntBASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 AC114876.1-201ENST00000490962 1366 ntBASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 AC123912.3-201ENST00000600907 1367 ntBASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 MTCO1P46-201ENST00000451639 1491 ntBASIC5.51□□□□□ -1.53
C9orf40Q8IXQ3 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 AC089998.1-201ENST00000548575 3141 ntBASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 MAPK10-261ENST00000641050 3109 ntBASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 OR7E25P-201ENST00000344844 931 ntBASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 LYPLA1P3-201ENST00000402650 695 ntBASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 AC016739.1-201ENST00000405359 345 ntBASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 SMC4P1-201ENST00000414479 527 ntBASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 RPS4XP5-201ENST00000419038 768 ntBASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 GAPDHP34-201ENST00000432112 823 ntBASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms