Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
SCUBE3Q8IX30 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SCUBE3Q8IX30 DET1-202ENST00000444300 2154 ntTSL 5 BASIC8.39□□□□□ -1.07
SCUBE3Q8IX30 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC8.39□□□□□ -1.07
SCUBE3Q8IX30 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC8.39□□□□□ -1.07
SCUBE3Q8IX30 AC012078.1-201ENST00000405035 1646 ntBASIC8.39□□□□□ -1.07
SCUBE3Q8IX30 AC012360.3-201ENST00000610036 3449 ntBASIC8.39□□□□□ -1.07
SCUBE3Q8IX30 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
SCUBE3Q8IX30 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SCUBE3Q8IX30 AC007823.1-201ENST00000569932 1566 ntBASIC8.39□□□□□ -1.07
SCUBE3Q8IX30 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
SCUBE3Q8IX30 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
SCUBE3Q8IX30 KIAA1217-201ENST00000307544 3281 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SCUBE3Q8IX30 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC8.39□□□□□ -1.07
SCUBE3Q8IX30 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC8.39□□□□□ -1.07
SCUBE3Q8IX30 SLC2A3P2-201ENST00000331747 1480 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 KIF4B-201ENST00000435029 4378 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 DCX-201ENST00000356220 3019 ntAPPRIS ALT1 TSL 5 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 MTND5P16-201ENST00000460269 1703 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 AC109315.1-201ENST00000584143 1347 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 VIT-202ENST00000379242 2810 ntAPPRIS P3 TSL 2 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 NBPF25P-201ENST00000606775 2019 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 Y_RNA.86-201ENST00000363020 111 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 Y_RNA.132-201ENST00000363421 102 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 RN7SKP76-201ENST00000364419 323 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 RNA5SP88-201ENST00000365560 109 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 Y_RNA.422-201ENST00000384054 114 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 AL080285.1-201ENST00000404225 984 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 IL6-206ENST00000407492 926 ntTSL 3 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 AMD1P2-201ENST00000412936 992 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 RAB9AP5-201ENST00000437794 597 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 RAB9AP2-201ENST00000443911 597 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 AL591438.2-201ENST00000452635 691 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 RN7SL740P-201ENST00000467060 344 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 RN7SL314P-201ENST00000490735 292 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 NPM1P27-201ENST00000502784 830 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 GAPDHP38-201ENST00000503632 1002 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 AC106800.2-201ENST00000514009 1103 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 CA1-215ENST00000522389 551 ntTSL 3 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 AL512360.1-201ENST00000555346 234 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 IGHV1OR15-4-201ENST00000560037 348 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 ATP5F1P7-201ENST00000567330 760 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 AC011712.1-201ENST00000588959 234 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 VN1R80P-201ENST00000597126 338 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 BMS1P7-201ENST00000602440 1052 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 AC087283.1-201ENST00000604029 1074 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 RN7SL840P-201ENST00000606883 284 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 AC107214.2-201ENST00000608204 634 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 AP001521.2-201ENST00000608772 546 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 HTR1DP1-201ENST00000616500 888 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 AC018692.2-201ENST00000624130 348 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 AC134981.1-201ENST00000628076 348 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 AC108724.2-201ENST00000634593 290 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 MAPK10-343ENST00000641677 2546 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 ZNF736P3Y-201ENST00000428264 1465 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 AC131392.2-201ENST00000505635 4332 ntBASIC8.38□□□□□ -1.07
SCUBE3Q8IX30 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms