Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 RPA2P3-201ENST00000533268 770 ntBASIC5.77□□□□□ -1.49
RIF1Q5UIP0 HIRAP1-201ENST00000605318 787 ntBASIC5.77□□□□□ -1.49
RIF1Q5UIP0 OR1N1-202ENST00000619659 939 ntBASIC5.77□□□□□ -1.49
RIF1Q5UIP0 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 AL360271.1-201ENST00000395679 510 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 GAPDHP42-201ENST00000406848 981 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 P2RY10P2-201ENST00000416730 913 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 AC019185.1-201ENST00000442718 389 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 CUBNP2-201ENST00000443534 1139 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 DEFA11P-201ENST00000446470 261 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 RPS29P33-201ENST00000456717 146 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 AL157777.1-201ENST00000468100 304 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 RPS18P6-201ENST00000476880 458 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 GTF2IP6-201ENST00000583143 541 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 WBP1LP8-201ENST00000617401 327 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 AC062022.1-201ENST00000451026 1684 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 RNA5SP131-201ENST00000365452 119 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 AC108075.1-201ENST00000424692 529 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 AC113412.1-201ENST00000425840 504 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 AC009120.1-201ENST00000493458 473 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 AC008897.1-201ENST00000494006 347 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 MRPS16P1-201ENST00000523462 412 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 TVP23CP2-201ENST00000571473 623 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 BNIP3P22-201ENST00000593399 556 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 AC012414.7-202ENST00000622705 1090 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 AL034417.4-202ENST00000642135 2236 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 GTF2IP4-201ENST00000453092 2054 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 AC011008.2-201ENST00000624866 3352 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 AC002090.1-201ENST00000625000 2138 ntBASIC5.76□□□□□ -1.49
RIF1Q5UIP0 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC5.76□□□□□ -1.49
RIF1Q5UIP0 RNA5SP305-201ENST00000362665 119 ntBASIC5.75□□□□□ -1.49
RIF1Q5UIP0 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.75□□□□□ -1.49
RIF1Q5UIP0 ERMN-202ENST00000409216 746 ntTSL 4 BASIC5.75□□□□□ -1.49
RIF1Q5UIP0 NRBF2P2-201ENST00000413087 861 ntBASIC5.75□□□□□ -1.49
RIF1Q5UIP0 NMD3P2-201ENST00000421815 761 ntBASIC5.75□□□□□ -1.49
RIF1Q5UIP0 AC012512.1-201ENST00000446594 718 ntBASIC5.75□□□□□ -1.49
RIF1Q5UIP0 RPS23P7-201ENST00000466210 444 ntBASIC5.75□□□□□ -1.49
RIF1Q5UIP0 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC5.75□□□□□ -1.49
RIF1Q5UIP0 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.75□□□□□ -1.49
RIF1Q5UIP0 AC005084.1-201ENST00000605160 304 ntBASIC5.75□□□□□ -1.49
RIF1Q5UIP0 AC026367.2-201ENST00000610630 553 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms