Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP3S2P59780 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
AP3S2P59780 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
AP3S2P59780 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.06□□□□□ -1.6
AP3S2P59780 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP3S2P59780 RPS7P8-201ENST00000418311 581 ntBASIC5.06□□□□□ -1.6
AP3S2P59780 RPS15AP30-201ENST00000420976 390 ntBASIC5.06□□□□□ -1.6
AP3S2P59780 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC5.06□□□□□ -1.6
AP3S2P59780 AC009362.1-201ENST00000427253 406 ntBASIC5.06□□□□□ -1.6
AP3S2P59780 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.06□□□□□ -1.6
AP3S2P59780 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC5.06□□□□□ -1.6
AP3S2P59780 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC5.06□□□□□ -1.6
AP3S2P59780 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.06□□□□□ -1.6
AP3S2P59780 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.06□□□□□ -1.6
AP3S2P59780 RPL6P24-201ENST00000445338 864 ntBASIC5.06□□□□□ -1.6
AP3S2P59780 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.06□□□□□ -1.6
AP3S2P59780 AC092421.1-201ENST00000448148 418 ntBASIC5.06□□□□□ -1.6
AP3S2P59780 UOX-201ENST00000471089 899 ntBASIC5.06□□□□□ -1.6
AP3S2P59780 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
AP3S2P59780 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
AP3S2P59780 Y_RNA.710-201ENST00000516975 110 ntBASIC5.06□□□□□ -1.6
AP3S2P59780 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.06□□□□□ -1.6
AP3S2P59780 AL133399.1-201ENST00000527476 298 ntBASIC5.06□□□□□ -1.6
AP3S2P59780 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC5.06□□□□□ -1.6
AP3S2P59780 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
AP3S2P59780 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
AP3S2P59780 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.06□□□□□ -1.6
AP3S2P59780 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.06□□□□□ -1.6
AP3S2P59780 CARSP1-201ENST00000603171 889 ntBASIC5.06□□□□□ -1.6
AP3S2P59780 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.06□□□□□ -1.6
AP3S2P59780 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC5.06□□□□□ -1.6
AP3S2P59780 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
AP3S2P59780 AC074140.1-201ENST00000621617 208 ntBASIC5.06□□□□□ -1.6
AP3S2P59780 AC073488.6-201ENST00000632293 754 ntBASIC5.06□□□□□ -1.6
AP3S2P59780 AC132825.8-201ENST00000640783 297 ntBASIC5.06□□□□□ -1.6
AP3S2P59780 AL360270.2-201ENST00000562952 5985 ntBASIC5.06□□□□□ -1.6
AP3S2P59780 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
AP3S2P59780 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP3S2P59780 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.06□□□□□ -1.6
AP3S2P59780 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
AP3S2P59780 HSPA8P14-201ENST00000552265 1805 ntBASIC5.06□□□□□ -1.6
AP3S2P59780 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.06□□□□□ -1.6
AP3S2P59780 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.06□□□□□ -1.6
AP3S2P59780 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
AP3S2P59780 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP3S2P59780 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
AP3S2P59780 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
AP3S2P59780 CASC19-248ENST00000641674 1356 ntBASIC5.05□□□□□ -1.6
AP3S2P59780 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
AP3S2P59780 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.05□□□□□ -1.6
AP3S2P59780 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
AP3S2P59780 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
AP3S2P59780 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
AP3S2P59780 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
AP3S2P59780 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
AP3S2P59780 AC092376.2-201ENST00000622621 4116 ntBASIC5.05□□□□□ -1.6
AP3S2P59780 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
AP3S2P59780 RNA5SP211-201ENST00000365516 117 ntBASIC5.05□□□□□ -1.6
AP3S2P59780 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.05□□□□□ -1.6
AP3S2P59780 RNU1-136P-201ENST00000384181 164 ntBASIC5.05□□□□□ -1.6
AP3S2P59780 MEG8-201ENST00000414488 800 ntTSL 3 BASIC5.05□□□□□ -1.6
AP3S2P59780 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
AP3S2P59780 AL359633.1-201ENST00000421403 310 ntBASIC5.05□□□□□ -1.6
AP3S2P59780 AC009784.1-201ENST00000426484 460 ntBASIC5.05□□□□□ -1.6
AP3S2P59780 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.05□□□□□ -1.6
AP3S2P59780 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.05□□□□□ -1.6
AP3S2P59780 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.05□□□□□ -1.6
AP3S2P59780 SOCS5P1-201ENST00000440415 949 ntBASIC5.05□□□□□ -1.6
AP3S2P59780 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.05□□□□□ -1.6
AP3S2P59780 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.05□□□□□ -1.6
AP3S2P59780 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
AP3S2P59780 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.05□□□□□ -1.6
AP3S2P59780 SDC4P-201ENST00000453285 601 ntBASIC5.05□□□□□ -1.6
AP3S2P59780 MEMO1P4-201ENST00000453590 386 ntBASIC5.05□□□□□ -1.6
AP3S2P59780 COX6B1P2-201ENST00000489624 230 ntBASIC5.05□□□□□ -1.6
AP3S2P59780 RPL5P3-201ENST00000493817 889 ntBASIC5.05□□□□□ -1.6
AP3S2P59780 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC5.05□□□□□ -1.6
AP3S2P59780 KHDC1P1-201ENST00000511053 508 ntBASIC5.05□□□□□ -1.6
AP3S2P59780 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.05□□□□□ -1.6
AP3S2P59780 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.05□□□□□ -1.6
AP3S2P59780 OR4A17P-201ENST00000526032 904 ntBASIC5.05□□□□□ -1.6
AP3S2P59780 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.05□□□□□ -1.6
AP3S2P59780 AC011193.2-201ENST00000582638 367 ntBASIC5.05□□□□□ -1.6
AP3S2P59780 AC005495.1-201ENST00000586611 1211 ntBASIC5.05□□□□□ -1.6
AP3S2P59780 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.05□□□□□ -1.6
AP3S2P59780 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.05□□□□□ -1.6
AP3S2P59780 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC5.05□□□□□ -1.6
AP3S2P59780 FAM72A-208ENST00000607379 1139 ntBASIC5.05□□□□□ -1.6
AP3S2P59780 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
AP3S2P59780 AC021766.1-201ENST00000624404 741 ntBASIC5.05□□□□□ -1.6
AP3S2P59780 AC027559.1-201ENST00000636288 271 ntBASIC5.05□□□□□ -1.6
AP3S2P59780 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.05□□□□□ -1.6
AP3S2P59780 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
AP3S2P59780 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.05□□□□□ -1.6
AP3S2P59780 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
AP3S2P59780 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
AP3S2P59780 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
AP3S2P59780 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
AP3S2P59780 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
AP3S2P59780 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms