Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RNU6-467P-201ENST00000517027 110 ntBASIC5.67□□□□□ -1.5
CLDN20P56880 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.67□□□□□ -1.5
CLDN20P56880 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN20P56880 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.67□□□□□ -1.5
CLDN20P56880 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN20P56880 AC009120.3-201ENST00000563335 499 ntBASIC5.67□□□□□ -1.5
CLDN20P56880 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
CLDN20P56880 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.67□□□□□ -1.5
CLDN20P56880 AC233702.7-202ENST00000582941 211 ntBASIC5.67□□□□□ -1.5
CLDN20P56880 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.67□□□□□ -1.5
CLDN20P56880 AC015802.5-201ENST00000607478 399 ntBASIC5.67□□□□□ -1.5
CLDN20P56880 AC097641.3-201ENST00000613523 464 ntBASIC5.67□□□□□ -1.5
CLDN20P56880 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
CLDN20P56880 MIR7109-201ENST00000613748 65 ntBASIC5.67□□□□□ -1.5
CLDN20P56880 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN20P56880 AL591926.1-201ENST00000620542 217 ntBASIC5.67□□□□□ -1.5
CLDN20P56880 MIR7159-201ENST00000620587 66 ntBASIC5.67□□□□□ -1.5
CLDN20P56880 AC000095.2-202ENST00000637415 154 ntBASIC5.67□□□□□ -1.5
CLDN20P56880 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
CLDN20P56880 CASC19-274ENST00000642018 970 ntBASIC5.67□□□□□ -1.5
CLDN20P56880 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CLDN20P56880 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
CLDN20P56880 AL513548.1-201ENST00000562904 1724 ntBASIC5.67□□□□□ -1.5
CLDN20P56880 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
CLDN20P56880 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.67□□□□□ -1.5
CLDN20P56880 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
CLDN20P56880 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.67□□□□□ -1.5
CLDN20P56880 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.67□□□□□ -1.5
CLDN20P56880 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CLDN20P56880 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN20P56880 AL133243.2-201ENST00000610331 1621 ntBASIC5.66□□□□□ -1.5
CLDN20P56880 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN20P56880 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
CLDN20P56880 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CLDN20P56880 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN20P56880 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CLDN20P56880 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN20P56880 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN20P56880 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.66□□□□□ -1.5
CLDN20P56880 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
CLDN20P56880 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN20P56880 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.66□□□□□ -1.5
CLDN20P56880 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.66□□□□□ -1.5
CLDN20P56880 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN20P56880 GUCY1B2-204ENST00000531898 1979 ntBASIC5.66□□□□□ -1.5
CLDN20P56880 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN20P56880 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
CLDN20P56880 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN20P56880 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN20P56880 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CLDN20P56880 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CLDN20P56880 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN20P56880 RNA5SP346-201ENST00000363541 121 ntBASIC5.66□□□□□ -1.5
CLDN20P56880 RNA5SP478-201ENST00000364657 115 ntBASIC5.66□□□□□ -1.5
CLDN20P56880 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN20P56880 AL139805.1-201ENST00000407837 289 ntBASIC5.66□□□□□ -1.5
CLDN20P56880 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.66□□□□□ -1.5
CLDN20P56880 RN7SKP121-201ENST00000410842 305 ntBASIC5.66□□□□□ -1.5
CLDN20P56880 AJ239321.1-201ENST00000424255 564 ntBASIC5.66□□□□□ -1.5
CLDN20P56880 MRPS21P2-201ENST00000424704 264 ntBASIC5.66□□□□□ -1.5
CLDN20P56880 AL392003.1-201ENST00000434394 243 ntBASIC5.66□□□□□ -1.5
CLDN20P56880 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.66□□□□□ -1.5
CLDN20P56880 AC093166.3-201ENST00000448785 303 ntBASIC5.66□□□□□ -1.5
CLDN20P56880 AC092967.1-201ENST00000449016 481 ntBASIC5.66□□□□□ -1.5
CLDN20P56880 C1DP3-201ENST00000455013 423 ntBASIC5.66□□□□□ -1.5
CLDN20P56880 RN7SL326P-201ENST00000477493 296 ntBASIC5.66□□□□□ -1.5
CLDN20P56880 RPL12P30-201ENST00000488389 499 ntBASIC5.66□□□□□ -1.5
CLDN20P56880 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.66□□□□□ -1.5
CLDN20P56880 SNX18P24-201ENST00000505249 671 ntBASIC5.66□□□□□ -1.5
CLDN20P56880 AC095052.1-201ENST00000509955 863 ntBASIC5.66□□□□□ -1.5
CLDN20P56880 KHDC1P1-201ENST00000511053 508 ntBASIC5.66□□□□□ -1.5
CLDN20P56880 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.66□□□□□ -1.5
CLDN20P56880 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.66□□□□□ -1.5
CLDN20P56880 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.66□□□□□ -1.5
CLDN20P56880 AC036111.2-201ENST00000533247 901 ntBASIC5.66□□□□□ -1.5
CLDN20P56880 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN20P56880 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.66□□□□□ -1.5
CLDN20P56880 OR4H6P-201ENST00000563771 921 ntBASIC5.66□□□□□ -1.5
CLDN20P56880 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.66□□□□□ -1.5
CLDN20P56880 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CLDN20P56880 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.66□□□□□ -1.5
CLDN20P56880 AC005972.3-201ENST00000606304 481 ntBASIC5.66□□□□□ -1.5
CLDN20P56880 OR7M1P-201ENST00000608946 533 ntBASIC5.66□□□□□ -1.5
CLDN20P56880 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.66□□□□□ -1.5
CLDN20P56880 AL590410.1-201ENST00000617925 333 ntBASIC5.66□□□□□ -1.5
CLDN20P56880 AC073488.6-201ENST00000632293 754 ntBASIC5.66□□□□□ -1.5
CLDN20P56880 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.66□□□□□ -1.5
CLDN20P56880 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN20P56880 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.66□□□□□ -1.5
CLDN20P56880 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.66□□□□□ -1.5
CLDN20P56880 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.66□□□□□ -1.5
CLDN20P56880 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.66□□□□□ -1.5
CLDN20P56880 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.66□□□□□ -1.5
CLDN20P56880 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLDN20P56880 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CLDN20P56880 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.5
CLDN20P56880 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLDN20P56880 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLDN20P56880 BIN2P1-201ENST00000504996 1530 ntBASIC5.65□□□□□ -1.5
CLDN20P56880 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms