Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AL020997.1-201ENST00000446554 349 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 AC073387.1-201ENST00000453261 709 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 AC092155.2-201ENST00000454675 477 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC6.97□□□□□ -1.29
EPHB3P54753 CTSLP6-201ENST00000458273 1002 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 RN7SL39P-201ENST00000462264 297 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 AC106822.1-201ENST00000502647 526 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
EPHB3P54753 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.97□□□□□ -1.29
EPHB3P54753 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC6.97□□□□□ -1.29
EPHB3P54753 RNU6-276P-201ENST00000516114 96 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 SNORA19.3-201ENST00000516165 130 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 SNORA74.1-201ENST00000516320 180 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.97□□□□□ -1.29
EPHB3P54753 AC010306.1-201ENST00000523223 1117 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 AC135983.3-201ENST00000528049 1226 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.97□□□□□ -1.29
EPHB3P54753 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.97□□□□□ -1.29
EPHB3P54753 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.97□□□□□ -1.29
EPHB3P54753 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.97□□□□□ -1.29
EPHB3P54753 RPL41P2-201ENST00000544920 409 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 AC009729.1-201ENST00000548873 1133 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 AC024909.2-201ENST00000553035 286 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.97□□□□□ -1.29
EPHB3P54753 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC6.97□□□□□ -1.29
EPHB3P54753 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.97□□□□□ -1.29
EPHB3P54753 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
EPHB3P54753 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
EPHB3P54753 AL356801.1-201ENST00000559320 294 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.97□□□□□ -1.29
EPHB3P54753 AP003115.1-201ENST00000569849 463 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 AC027455.1-201ENST00000574104 594 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC6.97□□□□□ -1.29
EPHB3P54753 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.97□□□□□ -1.29
EPHB3P54753 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.97□□□□□ -1.29
EPHB3P54753 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.97□□□□□ -1.29
EPHB3P54753 AC011921.2-201ENST00000589465 152 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.97□□□□□ -1.29
EPHB3P54753 AL049840.5-201ENST00000602827 552 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
EPHB3P54753 AC079949.2-201ENST00000617117 2933 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 AL122023.1-201ENST00000622847 530 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 AP000676.3-201ENST00000623299 569 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 AC093648.1-201ENST00000623546 606 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.97□□□□□ -1.29
EPHB3P54753 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
EPHB3P54753 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
EPHB3P54753 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
EPHB3P54753 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
EPHB3P54753 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.97□□□□□ -1.29
EPHB3P54753 AP005139.1-201ENST00000580702 1647 ntBASIC6.97□□□□□ -1.29
EPHB3P54753 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
EPHB3P54753 PARN-201ENST00000341484 2100 ntTSL 2 BASIC6.97□□□□□ -1.29
EPHB3P54753 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
EPHB3P54753 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
EPHB3P54753 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
EPHB3P54753 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
EPHB3P54753 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC6.97□□□□□ -1.29
EPHB3P54753 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
EPHB3P54753 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.96□□□□□ -1.29
EPHB3P54753 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
EPHB3P54753 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
EPHB3P54753 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
EPHB3P54753 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
EPHB3P54753 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.29
EPHB3P54753 AL034417.4-202ENST00000642135 2236 ntBASIC6.96□□□□□ -1.29
EPHB3P54753 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
EPHB3P54753 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
EPHB3P54753 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
EPHB3P54753 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.96□□□□□ -1.3
EPHB3P54753 AC005702.3-201ENST00000585345 1447 ntBASIC6.96□□□□□ -1.3
EPHB3P54753 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
EPHB3P54753 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.96□□□□□ -1.3
EPHB3P54753 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
EPHB3P54753 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
EPHB3P54753 RNU1-84P-201ENST00000365447 164 ntBASIC6.96□□□□□ -1.3
EPHB3P54753 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.96□□□□□ -1.3
EPHB3P54753 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC6.96□□□□□ -1.3
EPHB3P54753 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
EPHB3P54753 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
EPHB3P54753 RNU11-6P-201ENST00000391127 133 ntBASIC6.96□□□□□ -1.3
EPHB3P54753 NPM1P37-201ENST00000403105 874 ntBASIC6.96□□□□□ -1.3
EPHB3P54753 AL132875.1-201ENST00000403623 949 ntBASIC6.96□□□□□ -1.3
EPHB3P54753 AC233289.1-201ENST00000403700 508 ntBASIC6.96□□□□□ -1.3
EPHB3P54753 RAP1BP3-201ENST00000407180 549 ntBASIC6.96□□□□□ -1.3
EPHB3P54753 MIR1275-201ENST00000408770 80 ntBASIC6.96□□□□□ -1.3
EPHB3P54753 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
EPHB3P54753 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.96□□□□□ -1.3
EPHB3P54753 AC104339.1-201ENST00000465478 348 ntBASIC6.96□□□□□ -1.3
EPHB3P54753 CABYRP1-201ENST00000465493 1045 ntBASIC6.96□□□□□ -1.3
EPHB3P54753 RN7SL170P-201ENST00000487098 295 ntBASIC6.96□□□□□ -1.3
EPHB3P54753 RPL37P23-201ENST00000492641 294 ntBASIC6.96□□□□□ -1.3
EPHB3P54753 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
EPHB3P54753 HMGN1P16-201ENST00000508308 283 ntBASIC6.96□□□□□ -1.3
EPHB3P54753 AC108157.1-201ENST00000510511 539 ntBASIC6.96□□□□□ -1.3
EPHB3P54753 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.96□□□□□ -1.3
EPHB3P54753 OR52K3P-201ENST00000531655 943 ntBASIC6.96□□□□□ -1.3
EPHB3P54753 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.96□□□□□ -1.3
EPHB3P54753 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.96□□□□□ -1.3
EPHB3P54753 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms