Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CLTCL1P53675 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC8.24□□□□□ -1.09
CLTCL1P53675 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
CLTCL1P53675 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CLTCL1P53675 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CLTCL1P53675 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CLTCL1P53675 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
CLTCL1P53675 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CLTCL1P53675 RN7SKP28-201ENST00000364770 305 ntBASIC8.23□□□□□ -1.09
CLTCL1P53675 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
CLTCL1P53675 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
CLTCL1P53675 SPTLC1P2-201ENST00000407089 121 ntBASIC8.23□□□□□ -1.09
CLTCL1P53675 METTL15P3-201ENST00000415522 1221 ntBASIC8.23□□□□□ -1.09
CLTCL1P53675 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC8.23□□□□□ -1.09
CLTCL1P53675 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CLTCL1P53675 CYCSP6-201ENST00000434498 302 ntBASIC8.23□□□□□ -1.09
CLTCL1P53675 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC8.23□□□□□ -1.09
CLTCL1P53675 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC8.23□□□□□ -1.09
CLTCL1P53675 AL445687.2-201ENST00000458156 728 ntBASIC8.23□□□□□ -1.09
CLTCL1P53675 AC099521.1-201ENST00000482557 334 ntBASIC8.23□□□□□ -1.09
CLTCL1P53675 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC8.23□□□□□ -1.09
CLTCL1P53675 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC8.23□□□□□ -1.09
CLTCL1P53675 AC139697.1-201ENST00000548429 745 ntBASIC8.23□□□□□ -1.09
CLTCL1P53675 DPPA3P2-202ENST00000557188 1219 ntBASIC8.23□□□□□ -1.09
CLTCL1P53675 AC008115.4-201ENST00000619780 775 ntBASIC8.23□□□□□ -1.09
CLTCL1P53675 METTL15-211ENST00000634762 718 ntTSL 5 BASIC8.23□□□□□ -1.09
CLTCL1P53675 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CLTCL1P53675 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CLTCL1P53675 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CLTCL1P53675 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
CLTCL1P53675 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CLTCL1P53675 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CLTCL1P53675 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
CLTCL1P53675 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CLTCL1P53675 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CLTCL1P53675 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CLTCL1P53675 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
CLTCL1P53675 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
CLTCL1P53675 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC8.22□□□□□ -1.09
CLTCL1P53675 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
CLTCL1P53675 MIR133B-201ENST00000362210 119 ntBASIC8.22□□□□□ -1.09
CLTCL1P53675 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC8.22□□□□□ -1.09
CLTCL1P53675 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC8.22□□□□□ -1.09
CLTCL1P53675 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC8.22□□□□□ -1.09
CLTCL1P53675 HIGD1AP14-201ENST00000507617 282 ntBASIC8.22□□□□□ -1.09
CLTCL1P53675 RNA5SP92-201ENST00000516437 110 ntBASIC8.22□□□□□ -1.09
CLTCL1P53675 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC8.22□□□□□ -1.09
CLTCL1P53675 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC8.22□□□□□ -1.09
CLTCL1P53675 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC8.22□□□□□ -1.09
CLTCL1P53675 MRPS21P7-201ENST00000566937 238 ntBASIC8.22□□□□□ -1.09
CLTCL1P53675 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC8.22□□□□□ -1.09
CLTCL1P53675 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC8.22□□□□□ -1.09
CLTCL1P53675 FKBP1AP1-201ENST00000594588 318 ntBASIC8.22□□□□□ -1.09
CLTCL1P53675 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CLTCL1P53675 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
CLTCL1P53675 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CLTCL1P53675 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CLTCL1P53675 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC8.22□□□□□ -1.09
CLTCL1P53675 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CLTCL1P53675 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CLTCL1P53675 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CLTCL1P53675 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC8.22□□□□□ -1.09
CLTCL1P53675 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CLTCL1P53675 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CLTCL1P53675 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC8.22□□□□□ -1.09
CLTCL1P53675 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC8.22□□□□□ -1.09
CLTCL1P53675 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CLTCL1P53675 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CLTCL1P53675 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
CLTCL1P53675 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
CLTCL1P53675 SSX3-202ENST00000376893 800 ntTSL 2 BASIC8.21□□□□□ -1.09
CLTCL1P53675 MIR1286-201ENST00000408112 78 ntBASIC8.21□□□□□ -1.09
CLTCL1P53675 RMRPP5-201ENST00000411156 267 ntBASIC8.21□□□□□ -1.09
CLTCL1P53675 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC8.21□□□□□ -1.09
CLTCL1P53675 AL139148.1-201ENST00000427122 680 ntBASIC8.21□□□□□ -1.09
CLTCL1P53675 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC8.21□□□□□ -1.09
CLTCL1P53675 AL035090.1-201ENST00000454835 332 ntBASIC8.21□□□□□ -1.09
CLTCL1P53675 COX6B1P2-201ENST00000489624 230 ntBASIC8.21□□□□□ -1.09
CLTCL1P53675 DUTP1-201ENST00000493631 470 ntBASIC8.21□□□□□ -1.09
CLTCL1P53675 IGLV3-24-201ENST00000517477 197 ntBASIC8.21□□□□□ -1.09
CLTCL1P53675 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
CLTCL1P53675 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC8.21□□□□□ -1.09
CLTCL1P53675 RBM22P1-201ENST00000578589 1214 ntBASIC8.21□□□□□ -1.09
CLTCL1P53675 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC8.21□□□□□ -1.09
CLTCL1P53675 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC8.21□□□□□ -1.09
CLTCL1P53675 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC8.21□□□□□ -1.09
CLTCL1P53675 AL512329.2-201ENST00000607350 548 ntBASIC8.21□□□□□ -1.09
CLTCL1P53675 AC008115.3-201ENST00000614874 549 ntBASIC8.21□□□□□ -1.09
CLTCL1P53675 OFD1P17-201ENST00000437639 3018 ntBASIC8.21□□□□□ -1.09
CLTCL1P53675 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC8.21□□□□□ -1.09
CLTCL1P53675 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC8.21□□□□□ -1.09
CLTCL1P53675 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC8.21□□□□□ -1.09
CLTCL1P53675 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC8.21□□□□□ -1.09
CLTCL1P53675 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
CLTCL1P53675 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CLTCL1P53675 JPX-212ENST00000639185 9658 ntTSL 5 BASIC8.21□□□□□ -1.1
CLTCL1P53675 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC8.21□□□□□ -1.1
CLTCL1P53675 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC8.21□□□□□ -1.1
CLTCL1P53675 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
CLTCL1P53675 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms