Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC6.18□□□□□ -1.42
HTTP42858 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.18□□□□□ -1.42
HTTP42858 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HTTP42858 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.18□□□□□ -1.42
HTTP42858 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.18□□□□□ -1.42
HTTP42858 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HTTP42858 AL162431.4-201ENST00000604674 411 ntBASIC6.18□□□□□ -1.42
HTTP42858 KANSL3-206ENST00000431828 5153 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HTTP42858 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HTTP42858 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HTTP42858 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.18□□□□□ -1.42
HTTP42858 PAICS-207ENST00000512576 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HTTP42858 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HTTP42858 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HTTP42858 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.18□□□□□ -1.42
HTTP42858 USP9YP3-201ENST00000434481 1766 ntBASIC6.17□□□□□ -1.42
HTTP42858 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HTTP42858 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HTTP42858 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.17□□□□□ -1.42
HTTP42858 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HTTP42858 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HTTP42858 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.17□□□□□ -1.42
HTTP42858 C4BPAP2-201ENST00000428434 478 ntBASIC6.17□□□□□ -1.42
HTTP42858 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.17□□□□□ -1.42
HTTP42858 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HTTP42858 AC018558.5-201ENST00000565840 952 ntBASIC6.17□□□□□ -1.42
HTTP42858 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.17□□□□□ -1.42
HTTP42858 RN7SL690P-201ENST00000582087 240 ntBASIC6.17□□□□□ -1.42
HTTP42858 AC090607.5-201ENST00000615692 224 ntBASIC6.17□□□□□ -1.42
HTTP42858 ITGB6-211ENST00000620391 4401 ntTSL 3 BASIC6.17□□□□□ -1.42
HTTP42858 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC6.17□□□□□ -1.42
HTTP42858 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HTTP42858 SYNJ2-207ENST00000638626 7332 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HTTP42858 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
HTTP42858 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC6.17□□□□□ -1.42
HTTP42858 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HTTP42858 EML5-201ENST00000380664 5910 ntTSL 5 BASIC6.17□□□□□ -1.42
HTTP42858 AC011379.1-201ENST00000508713 3025 ntBASIC6.17□□□□□ -1.42
HTTP42858 LINC00963-202ENST00000419300 9557 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HTTP42858 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.17□□□□□ -1.42
HTTP42858 CBFA2T2-206ENST00000397800 7449 ntTSL 5 BASIC6.17□□□□□ -1.42
HTTP42858 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HTTP42858 DNAH14-211ENST00000445597 10524 ntTSL 5 BASIC6.17□□□□□ -1.42
HTTP42858 SALL4P7-201ENST00000555779 3120 ntBASIC6.17□□□□□ -1.42
HTTP42858 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.17□□□□□ -1.42
HTTP42858 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.17□□□□□ -1.42
HTTP42858 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC6.17□□□□□ -1.42
HTTP42858 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.17□□□□□ -1.42
HTTP42858 RN7SL604P-201ENST00000492589 296 ntBASIC6.17□□□□□ -1.42
HTTP42858 AC025674.1-201ENST00000507074 324 ntBASIC6.17□□□□□ -1.42
HTTP42858 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.17□□□□□ -1.42
HTTP42858 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.17□□□□□ -1.42
HTTP42858 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.17□□□□□ -1.42
HTTP42858 DPPA3P2-202ENST00000557188 1219 ntBASIC6.17□□□□□ -1.42
HTTP42858 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.17□□□□□ -1.42
HTTP42858 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.17□□□□□ -1.42
HTTP42858 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HTTP42858 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC6.17□□□□□ -1.42
HTTP42858 AL031123.3-201ENST00000623345 1837 ntBASIC6.17□□□□□ -1.42
HTTP42858 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HTTP42858 MXRA5Y-201ENST00000420610 8000 ntBASIC6.17□□□□□ -1.42
HTTP42858 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.17□□□□□ -1.42
HTTP42858 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HTTP42858 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.17□□□□□ -1.42
HTTP42858 COL4A4-201ENST00000396625 9895 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HTTP42858 CEP41-201ENST00000223208 6513 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HTTP42858 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HTTP42858 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HTTP42858 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.16□□□□□ -1.42
HTTP42858 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.16□□□□□ -1.42
HTTP42858 HPRT1P1-201ENST00000509498 657 ntBASIC6.16□□□□□ -1.42
HTTP42858 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.16□□□□□ -1.42
HTTP42858 AL391261.1-201ENST00000555712 1479 ntBASIC6.16□□□□□ -1.42
HTTP42858 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HTTP42858 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HTTP42858 AC091046.3-201ENST00000631455 1574 ntBASIC6.16□□□□□ -1.42
HTTP42858 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
HTTP42858 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HTTP42858 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HTTP42858 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.16□□□□□ -1.42
HTTP42858 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.16□□□□□ -1.42
HTTP42858 AC100871.1-201ENST00000507871 1456 ntBASIC6.16□□□□□ -1.42
HTTP42858 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HTTP42858 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HTTP42858 MIR23A-201ENST00000385245 73 ntBASIC6.16□□□□□ -1.42
HTTP42858 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.16□□□□□ -1.42
HTTP42858 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
HTTP42858 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.16□□□□□ -1.42
HTTP42858 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.16□□□□□ -1.42
HTTP42858 OR4H6P-201ENST00000563771 921 ntBASIC6.16□□□□□ -1.42
HTTP42858 AC095055.1-201ENST00000603472 1113 ntBASIC6.16□□□□□ -1.42
HTTP42858 KPNB1-201ENST00000290158 6139 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HTTP42858 THSD7A-202ENST00000423059 10663 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
HTTP42858 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HTTP42858 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HTTP42858 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC6.16□□□□□ -1.42
HTTP42858 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HTTP42858 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HTTP42858 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HTTP42858 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms