Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.58□□□□□ -1.52
APOBEC1P41238 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
APOBEC1P41238 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
APOBEC1P41238 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.58□□□□□ -1.52
APOBEC1P41238 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
APOBEC1P41238 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
APOBEC1P41238 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
APOBEC1P41238 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
APOBEC1P41238 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.58□□□□□ -1.52
APOBEC1P41238 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
APOBEC1P41238 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
APOBEC1P41238 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
APOBEC1P41238 CCAT2-201ENST00000630920 1752 ntBASIC5.57□□□□□ -1.52
APOBEC1P41238 AC114876.1-201ENST00000490962 1366 ntBASIC5.57□□□□□ -1.52
APOBEC1P41238 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
APOBEC1P41238 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
APOBEC1P41238 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
APOBEC1P41238 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
APOBEC1P41238 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
APOBEC1P41238 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
APOBEC1P41238 Y_RNA.110-201ENST00000363220 99 ntBASIC5.57□□□□□ -1.52
APOBEC1P41238 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.57□□□□□ -1.52
APOBEC1P41238 RNU6-152P-201ENST00000384037 107 ntBASIC5.57□□□□□ -1.52
APOBEC1P41238 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
APOBEC1P41238 RNA5SP251-201ENST00000410614 137 ntBASIC5.57□□□□□ -1.52
APOBEC1P41238 RPL23AP18-201ENST00000416139 468 ntBASIC5.57□□□□□ -1.52
APOBEC1P41238 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.57□□□□□ -1.52
APOBEC1P41238 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.57□□□□□ -1.52
APOBEC1P41238 AC092865.3-201ENST00000425390 1026 ntBASIC5.57□□□□□ -1.52
APOBEC1P41238 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.57□□□□□ -1.52
APOBEC1P41238 AC016027.5-201ENST00000427227 210 ntBASIC5.57□□□□□ -1.52
APOBEC1P41238 PSMD10P2-201ENST00000432890 672 ntBASIC5.57□□□□□ -1.52
APOBEC1P41238 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.57□□□□□ -1.52
APOBEC1P41238 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.57□□□□□ -1.52
APOBEC1P41238 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
APOBEC1P41238 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.57□□□□□ -1.52
APOBEC1P41238 AC112187.1-201ENST00000455837 479 ntBASIC5.57□□□□□ -1.52
APOBEC1P41238 RN7SL254P-201ENST00000460609 284 ntBASIC5.57□□□□□ -1.52
APOBEC1P41238 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.57□□□□□ -1.52
APOBEC1P41238 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.57□□□□□ -1.52
APOBEC1P41238 AC009879.1-201ENST00000520029 839 ntBASIC5.57□□□□□ -1.52
APOBEC1P41238 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.57□□□□□ -1.52
APOBEC1P41238 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.57□□□□□ -1.52
APOBEC1P41238 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.57□□□□□ -1.52
APOBEC1P41238 AP001804.1-201ENST00000526868 919 ntBASIC5.57□□□□□ -1.52
APOBEC1P41238 GTF2IP11-201ENST00000526931 420 ntBASIC5.57□□□□□ -1.52
APOBEC1P41238 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.57□□□□□ -1.52
APOBEC1P41238 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
APOBEC1P41238 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
APOBEC1P41238 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.57□□□□□ -1.52
APOBEC1P41238 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
APOBEC1P41238 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
APOBEC1P41238 DPPA3P2-202ENST00000557188 1219 ntBASIC5.57□□□□□ -1.52
APOBEC1P41238 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.57□□□□□ -1.52
APOBEC1P41238 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.57□□□□□ -1.52
APOBEC1P41238 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.57□□□□□ -1.52
APOBEC1P41238 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.57□□□□□ -1.52
APOBEC1P41238 LINC00557-201ENST00000563184 1279 ntBASIC5.57□□□□□ -1.52
APOBEC1P41238 AC027281.1-201ENST00000574178 758 ntBASIC5.57□□□□□ -1.52
APOBEC1P41238 AC020978.7-201ENST00000575953 1187 ntBASIC5.57□□□□□ -1.52
APOBEC1P41238 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.57□□□□□ -1.52
APOBEC1P41238 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.57□□□□□ -1.52
APOBEC1P41238 AC027334.1-201ENST00000603257 310 ntBASIC5.57□□□□□ -1.52
APOBEC1P41238 AC141002.1-201ENST00000607025 279 ntBASIC5.57□□□□□ -1.52
APOBEC1P41238 AC005828.7-201ENST00000607331 556 ntBASIC5.57□□□□□ -1.52
APOBEC1P41238 AC018690.1-201ENST00000608144 626 ntBASIC5.57□□□□□ -1.52
APOBEC1P41238 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.57□□□□□ -1.52
APOBEC1P41238 AC022106.1-201ENST00000612834 766 ntBASIC5.57□□□□□ -1.52
APOBEC1P41238 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
APOBEC1P41238 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.57□□□□□ -1.52
APOBEC1P41238 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.57□□□□□ -1.52
APOBEC1P41238 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.57□□□□□ -1.52
APOBEC1P41238 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.57□□□□□ -1.52
APOBEC1P41238 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
APOBEC1P41238 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
APOBEC1P41238 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
APOBEC1P41238 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
APOBEC1P41238 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.57□□□□□ -1.52
APOBEC1P41238 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
APOBEC1P41238 AC005225.5-201ENST00000623547 2225 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
APOBEC1P41238 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
APOBEC1P41238 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.56□□□□□ -1.52
APOBEC1P41238 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
APOBEC1P41238 AC087565.3-202ENST00000642085 1603 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
APOBEC1P41238 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
APOBEC1P41238 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.56□□□□□ -1.52
APOBEC1P41238 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
APOBEC1P41238 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
APOBEC1P41238 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.56□□□□□ -1.52
APOBEC1P41238 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.56□□□□□ -1.52
APOBEC1P41238 AL353625.1-202ENST00000366273 571 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.56□□□□□ -1.52
APOBEC1P41238 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.56□□□□□ -1.52
APOBEC1P41238 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
APOBEC1P41238 SNORA70.9-201ENST00000384370 135 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
APOBEC1P41238 RN7SKP86-201ENST00000410454 332 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms